Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC7.16□□□□□ -1.26
Ubr4A2AN08 Apobr-203ENSMUST00000137646 457 ntAPPRIS ALT2 TSL 2 BASIC7.16□□□□□ -1.26
Ubr4A2AN08 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Ubr4A2AN08 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC7.16□□□□□ -1.26
Ubr4A2AN08 Hpf1-201ENSMUST00000037190 1191 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Ubr4A2AN08 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Ubr4A2AN08 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Ubr4A2AN08 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Ubr4A2AN08 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC7.16□□□□□ -1.26
Ubr4A2AN08 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Ubr4A2AN08 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC7.16□□□□□ -1.26
Ubr4A2AN08 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Ubr4A2AN08 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
Ubr4A2AN08 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Ubr4A2AN08 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Ubr4A2AN08 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
Ubr4A2AN08 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Ubr4A2AN08 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC7.16□□□□□ -1.26
Ubr4A2AN08 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Ubr4A2AN08 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC7.16□□□□□ -1.26
Ubr4A2AN08 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Ubr4A2AN08 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Ubr4A2AN08 Mir7076-201ENSMUST00000183519 74 ntBASIC7.16□□□□□ -1.26
Ubr4A2AN08 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Ubr4A2AN08 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC7.16□□□□□ -1.26
Ubr4A2AN08 Gm44814-201ENSMUST00000207018 434 ntBASIC7.16□□□□□ -1.26
Ubr4A2AN08 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Ubr4A2AN08 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Ubr4A2AN08 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Ubr4A2AN08 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Ubr4A2AN08 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Ubr4A2AN08 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Ubr4A2AN08 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Ubr4A2AN08 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Ubr4A2AN08 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Ubr4A2AN08 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Ubr4A2AN08 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Ubr4A2AN08 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Ubr4A2AN08 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Ubr4A2AN08 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC7.16□□□□□ -1.26
Ubr4A2AN08 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC7.16□□□□□ -1.26
Ubr4A2AN08 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Ubr4A2AN08 Gm14004-201ENSMUST00000138875 590 ntTSL 2 BASIC7.16□□□□□ -1.26
Ubr4A2AN08 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC7.16□□□□□ -1.26
Ubr4A2AN08 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC7.16□□□□□ -1.26
Ubr4A2AN08 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Ubr4A2AN08 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC7.16□□□□□ -1.26
Ubr4A2AN08 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Ubr4A2AN08 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Ubr4A2AN08 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Ubr4A2AN08 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Ubr4A2AN08 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Ubr4A2AN08 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Ubr4A2AN08 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
Ubr4A2AN08 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Ubr4A2AN08 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Ubr4A2AN08 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Ubr4A2AN08 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Ubr4A2AN08 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC7.15□□□□□ -1.26
Ubr4A2AN08 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC7.15□□□□□ -1.26
Ubr4A2AN08 Gm43997-201ENSMUST00000203986 1005 ntBASIC7.15□□□□□ -1.26
Ubr4A2AN08 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC7.15□□□□□ -1.26
Ubr4A2AN08 Gm44069-201ENSMUST00000204898 506 ntBASIC7.15□□□□□ -1.26
Ubr4A2AN08 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Ubr4A2AN08 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
Ubr4A2AN08 Snora73b-201ENSMUST00000083419 205 ntBASIC7.15□□□□□ -1.26
Ubr4A2AN08 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Ubr4A2AN08 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Ubr4A2AN08 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC7.15□□□□□ -1.26
Ubr4A2AN08 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Ubr4A2AN08 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Ubr4A2AN08 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.26
Ubr4A2AN08 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Ubr4A2AN08 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Ubr4A2AN08 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC7.15□□□□□ -1.26
Ubr4A2AN08 Gm12539-201ENSMUST00000121549 1098 ntBASIC7.15□□□□□ -1.26
Ubr4A2AN08 Gm43854-201ENSMUST00000200418 394 ntBASIC7.15□□□□□ -1.26
Ubr4A2AN08 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Ubr4A2AN08 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Ubr4A2AN08 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Ubr4A2AN08 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
Ubr4A2AN08 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Ubr4A2AN08 Gm44616-201ENSMUST00000206417 1732 ntBASIC7.15□□□□□ -1.26
Ubr4A2AN08 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC7.15□□□□□ -1.26
Ubr4A2AN08 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC7.15□□□□□ -1.26
Ubr4A2AN08 Gm14058-201ENSMUST00000116082 735 ntBASIC7.15□□□□□ -1.26
Ubr4A2AN08 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Ubr4A2AN08 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC7.15□□□□□ -1.26
Ubr4A2AN08 Gm2231-201ENSMUST00000125661 612 ntBASIC7.15□□□□□ -1.26
Ubr4A2AN08 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC7.15□□□□□ -1.26
Ubr4A2AN08 Mir6998-201ENSMUST00000183343 64 ntBASIC7.15□□□□□ -1.26
Ubr4A2AN08 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Ubr4A2AN08 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC7.15□□□□□ -1.27
Ubr4A2AN08 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC7.15□□□□□ -1.27
Ubr4A2AN08 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Ubr4A2AN08 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC7.15□□□□□ -1.27
Ubr4A2AN08 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Ubr4A2AN08 Gm23949-201ENSMUST00000104027 127 ntBASIC7.15□□□□□ -1.27
Ubr4A2AN08 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC7.15□□□□□ -1.27
Ubr4A2AN08 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC7.15□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms