Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC11.64□□□□□ -0.55
Trav12-1A0N8R1 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC11.64□□□□□ -0.55
Trav12-1A0N8R1 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12-1A0N8R1 Gm44719-201ENSMUST00000206404 149 ntBASIC11.64□□□□□ -0.55
Trav12-1A0N8R1 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC11.64□□□□□ -0.55
Trav12-1A0N8R1 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12-1A0N8R1 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Trav12-1A0N8R1 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12-1A0N8R1 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Trav12-1A0N8R1 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12-1A0N8R1 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC11.64□□□□□ -0.55
Trav12-1A0N8R1 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12-1A0N8R1 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12-1A0N8R1 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12-1A0N8R1 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12-1A0N8R1 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12-1A0N8R1 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12-1A0N8R1 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12-1A0N8R1 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Trav12-1A0N8R1 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12-1A0N8R1 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12-1A0N8R1 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
Trav12-1A0N8R1 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12-1A0N8R1 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12-1A0N8R1 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12-1A0N8R1 Gm45751-201ENSMUST00000210185 1573 ntBASIC11.63□□□□□ -0.55
Trav12-1A0N8R1 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12-1A0N8R1 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Trav12-1A0N8R1 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12-1A0N8R1 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12-1A0N8R1 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12-1A0N8R1 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12-1A0N8R1 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12-1A0N8R1 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Trav12-1A0N8R1 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Trav12-1A0N8R1 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC11.63□□□□□ -0.55
Trav12-1A0N8R1 Gm13823-201ENSMUST00000119930 345 ntBASIC11.63□□□□□ -0.55
Trav12-1A0N8R1 Gm6222-201ENSMUST00000120787 396 ntBASIC11.63□□□□□ -0.55
Trav12-1A0N8R1 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC11.63□□□□□ -0.55
Trav12-1A0N8R1 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12-1A0N8R1 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12-1A0N8R1 Gm3809-201ENSMUST00000180973 1006 ntBASIC11.63□□□□□ -0.55
Trav12-1A0N8R1 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC11.63□□□□□ -0.55
Trav12-1A0N8R1 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC11.63□□□□□ -0.55
Trav12-1A0N8R1 AC090659.1-201ENSMUST00000224334 768 ntBASIC11.63□□□□□ -0.55
Trav12-1A0N8R1 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12-1A0N8R1 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12-1A0N8R1 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12-1A0N8R1 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12-1A0N8R1 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Trav12-1A0N8R1 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12-1A0N8R1 Nrn1-204ENSMUST00000224323 1779 ntBASIC11.63□□□□□ -0.55
Trav12-1A0N8R1 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12-1A0N8R1 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12-1A0N8R1 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12-1A0N8R1 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12-1A0N8R1 Gm42928-201ENSMUST00000197338 3339 ntBASIC11.63□□□□□ -0.55
Trav12-1A0N8R1 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12-1A0N8R1 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12-1A0N8R1 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Trav12-1A0N8R1 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12-1A0N8R1 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12-1A0N8R1 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav12-1A0N8R1 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav12-1A0N8R1 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav12-1A0N8R1 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav12-1A0N8R1 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav12-1A0N8R1 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav12-1A0N8R1 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav12-1A0N8R1 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC11.62□□□□□ -0.55
Trav12-1A0N8R1 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC11.62□□□□□ -0.55
Trav12-1A0N8R1 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav12-1A0N8R1 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC11.62□□□□□ -0.55
Trav12-1A0N8R1 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Trav12-1A0N8R1 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav12-1A0N8R1 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC11.62□□□□□ -0.55
Trav12-1A0N8R1 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC11.62□□□□□ -0.55
Trav12-1A0N8R1 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav12-1A0N8R1 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC11.62□□□□□ -0.55
Trav12-1A0N8R1 Gm5628-201ENSMUST00000222318 1049 ntBASIC11.62□□□□□ -0.55
Trav12-1A0N8R1 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav12-1A0N8R1 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav12-1A0N8R1 Gm12500-202ENSMUST00000186471 2428 ntBASIC11.62□□□□□ -0.55
Trav12-1A0N8R1 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav12-1A0N8R1 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav12-1A0N8R1 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav12-1A0N8R1 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Trav12-1A0N8R1 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav12-1A0N8R1 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav12-1A0N8R1 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav12-1A0N8R1 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav12-1A0N8R1 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC11.62□□□□□ -0.55
Trav12-1A0N8R1 Gm43570-201ENSMUST00000199951 3688 ntBASIC11.62□□□□□ -0.55
Trav12-1A0N8R1 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC11.61□□□□□ -0.55
Trav12-1A0N8R1 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav12-1A0N8R1 Gm38094-201ENSMUST00000195864 2978 ntBASIC11.61□□□□□ -0.55
Trav12-1A0N8R1 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav12-1A0N8R1 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC11.61□□□□□ -0.55
Trav12-1A0N8R1 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Trav12-1A0N8R1 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms