Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Gm12350-201ENSMUST00000121208 462 ntBASIC9.61□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC9.61□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC9.61□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC9.61□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC9.61□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Gm2651-201ENSMUST00000203560 838 ntBASIC9.61□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC9.61□□□□□ -0.87
Trav13d-4A0A0G2JFX3 AC154222.1-201ENSMUST00000223882 475 ntBASIC9.61□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav13d-4A0A0G2JFX3 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC9.61□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav13d-4A0A0G2JFX3 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Gm2420-202ENSMUST00000202224 2249 ntBASIC9.6□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC9.6□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC9.6□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC9.6□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC9.6□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Gm45747-201ENSMUST00000212203 999 ntBASIC9.6□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Gm12626-201ENSMUST00000117339 1983 ntBASIC9.6□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Gm12623-201ENSMUST00000119849 1983 ntBASIC9.6□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC9.6□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC9.6□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav13d-4A0A0G2JFX3 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms