Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC10.57□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC10.57□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC10.57□□□□□ -0.72
Trav3n-3A0A0G2JEM0 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC10.57□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC10.56□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3n-3A0A0G2JEM0 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC10.56□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Trav13-3-201ENSMUST00000117226 336 ntBASIC10.56□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Gm15593-201ENSMUST00000122085 1008 ntBASIC10.56□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC10.56□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Trav3n-3A0A0G2JEM0 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3n-3A0A0G2JEM0 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC10.56□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC10.56□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC10.56□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC10.56□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3n-3A0A0G2JEM0 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC10.56□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC10.56□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3n-3A0A0G2JEM0 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3n-3A0A0G2JEM0 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3n-3A0A0G2JEM0 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC10.55□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3n-3A0A0G2JEM0 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Gm25990-201ENSMUST00000102440 86 ntBASIC10.55□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Gm13418-201ENSMUST00000119097 944 ntBASIC10.55□□□□□ -0.72
Trav3n-3A0A0G2JEM0 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC10.55□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC10.55□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3n-3A0A0G2JEM0 AC164567.1-201ENSMUST00000219185 960 ntBASIC10.55□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC10.55□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3n-3A0A0G2JEM0 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Gm7899-201ENSMUST00000192935 1897 ntBASIC10.55□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms