Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
H2afb2S4R1M3 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC13.99□□□□□ -0.17
H2afb2S4R1M3 AC124732.2-201ENSMUST00000221977 316 ntBASIC13.99□□□□□ -0.17
H2afb2S4R1M3 Shd-206ENSMUST00000225145 998 ntBASIC13.99□□□□□ -0.17
H2afb2S4R1M3 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
H2afb2S4R1M3 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
H2afb2S4R1M3 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
H2afb2S4R1M3 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
H2afb2S4R1M3 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
H2afb2S4R1M3 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
H2afb2S4R1M3 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
H2afb2S4R1M3 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
H2afb2S4R1M3 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
H2afb2S4R1M3 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.99□□□□□ -0.17
H2afb2S4R1M3 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
H2afb2S4R1M3 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
H2afb2S4R1M3 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
H2afb2S4R1M3 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
H2afb2S4R1M3 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
H2afb2S4R1M3 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
H2afb2S4R1M3 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
H2afb2S4R1M3 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
H2afb2S4R1M3 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
H2afb2S4R1M3 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.98□□□□□ -0.17
H2afb2S4R1M3 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.98□□□□□ -0.17
H2afb2S4R1M3 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
H2afb2S4R1M3 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
H2afb2S4R1M3 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
H2afb2S4R1M3 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
H2afb2S4R1M3 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
H2afb2S4R1M3 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
H2afb2S4R1M3 Gm15653-201ENSMUST00000119247 907 ntBASIC13.98□□□□□ -0.17
H2afb2S4R1M3 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC13.98□□□□□ -0.17
H2afb2S4R1M3 Gm25144-201ENSMUST00000179561 110 ntBASIC13.98□□□□□ -0.17
H2afb2S4R1M3 Gm25352-201ENSMUST00000179815 110 ntBASIC13.98□□□□□ -0.17
H2afb2S4R1M3 Gm27533-201ENSMUST00000183800 152 ntBASIC13.98□□□□□ -0.17
H2afb2S4R1M3 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC13.98□□□□□ -0.17
H2afb2S4R1M3 Gm37714-201ENSMUST00000194742 342 ntBASIC13.98□□□□□ -0.17
H2afb2S4R1M3 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
H2afb2S4R1M3 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
H2afb2S4R1M3 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
H2afb2S4R1M3 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
H2afb2S4R1M3 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
H2afb2S4R1M3 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13.98□□□□□ -0.17
H2afb2S4R1M3 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
H2afb2S4R1M3 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
H2afb2S4R1M3 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
H2afb2S4R1M3 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
H2afb2S4R1M3 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
H2afb2S4R1M3 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
H2afb2S4R1M3 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
H2afb2S4R1M3 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
H2afb2S4R1M3 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
H2afb2S4R1M3 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
H2afb2S4R1M3 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
H2afb2S4R1M3 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
H2afb2S4R1M3 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
H2afb2S4R1M3 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
H2afb2S4R1M3 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
H2afb2S4R1M3 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
H2afb2S4R1M3 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
H2afb2S4R1M3 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
H2afb2S4R1M3 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.97□□□□□ -0.17
H2afb2S4R1M3 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
H2afb2S4R1M3 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
H2afb2S4R1M3 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC13.97□□□□□ -0.17
H2afb2S4R1M3 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
H2afb2S4R1M3 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
H2afb2S4R1M3 Gm33320-201ENSMUST00000192232 530 ntBASIC13.97□□□□□ -0.17
H2afb2S4R1M3 AC156016.3-201ENSMUST00000228623 344 ntBASIC13.97□□□□□ -0.17
H2afb2S4R1M3 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
H2afb2S4R1M3 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
H2afb2S4R1M3 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
H2afb2S4R1M3 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
H2afb2S4R1M3 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
H2afb2S4R1M3 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
H2afb2S4R1M3 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
H2afb2S4R1M3 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
H2afb2S4R1M3 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
H2afb2S4R1M3 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
H2afb2S4R1M3 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
H2afb2S4R1M3 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
H2afb2S4R1M3 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
H2afb2S4R1M3 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
H2afb2S4R1M3 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
H2afb2S4R1M3 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
H2afb2S4R1M3 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
H2afb2S4R1M3 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
H2afb2S4R1M3 AC154767.3-201ENSMUST00000225150 1342 ntBASIC13.96□□□□□ -0.17
H2afb2S4R1M3 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
H2afb2S4R1M3 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
H2afb2S4R1M3 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
H2afb2S4R1M3 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
H2afb2S4R1M3 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
H2afb2S4R1M3 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
H2afb2S4R1M3 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
H2afb2S4R1M3 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
H2afb2S4R1M3 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
H2afb2S4R1M3 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
H2afb2S4R1M3 Gm22175-201ENSMUST00000175007 78 ntBASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms