Protein–RNA interactions for Protein: Q9Z0S4

Cldn13, Claudin-13, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn13Q9Z0S4 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cldn13Q9Z0S4 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Cldn13Q9Z0S4 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cldn13Q9Z0S4 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Cldn13Q9Z0S4 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cldn13Q9Z0S4 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Cldn13Q9Z0S4 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Cldn13Q9Z0S4 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cldn13Q9Z0S4 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cldn13Q9Z0S4 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cldn13Q9Z0S4 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Cldn13Q9Z0S4 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cldn13Q9Z0S4 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cldn13Q9Z0S4 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.48□□□□□ -0.41
Cldn13Q9Z0S4 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.47□□□□□ -0.41
Cldn13Q9Z0S4 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cldn13Q9Z0S4 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cldn13Q9Z0S4 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Cldn13Q9Z0S4 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cldn13Q9Z0S4 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC12.47□□□□□ -0.41
Cldn13Q9Z0S4 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC12.47□□□□□ -0.41
Cldn13Q9Z0S4 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
Cldn13Q9Z0S4 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cldn13Q9Z0S4 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cldn13Q9Z0S4 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cldn13Q9Z0S4 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Cldn13Q9Z0S4 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cldn13Q9Z0S4 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cldn13Q9Z0S4 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cldn13Q9Z0S4 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Cldn13Q9Z0S4 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cldn13Q9Z0S4 Gm24543-201ENSMUST00000103867 82 ntBASIC12.47□□□□□ -0.41
Cldn13Q9Z0S4 Gm6222-201ENSMUST00000120787 396 ntBASIC12.47□□□□□ -0.41
Cldn13Q9Z0S4 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cldn13Q9Z0S4 Gm27533-201ENSMUST00000183800 152 ntBASIC12.47□□□□□ -0.41
Cldn13Q9Z0S4 Gm27631-201ENSMUST00000184163 466 ntBASIC12.47□□□□□ -0.41
Cldn13Q9Z0S4 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cldn13Q9Z0S4 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cldn13Q9Z0S4 AC149588.3-201ENSMUST00000227515 150 ntBASIC12.47□□□□□ -0.41
Cldn13Q9Z0S4 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Cldn13Q9Z0S4 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Cldn13Q9Z0S4 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cldn13Q9Z0S4 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cldn13Q9Z0S4 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.47□□□□□ -0.41
Cldn13Q9Z0S4 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC12.47□□□□□ -0.41
Cldn13Q9Z0S4 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cldn13Q9Z0S4 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cldn13Q9Z0S4 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cldn13Q9Z0S4 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cldn13Q9Z0S4 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cldn13Q9Z0S4 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cldn13Q9Z0S4 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.47□□□□□ -0.41
Cldn13Q9Z0S4 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.47□□□□□ -0.41
Cldn13Q9Z0S4 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cldn13Q9Z0S4 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cldn13Q9Z0S4 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC12.46□□□□□ -0.41
Cldn13Q9Z0S4 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cldn13Q9Z0S4 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cldn13Q9Z0S4 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cldn13Q9Z0S4 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cldn13Q9Z0S4 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cldn13Q9Z0S4 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cldn13Q9Z0S4 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cldn13Q9Z0S4 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cldn13Q9Z0S4 Gm15889-202ENSMUST00000212669 2443 ntBASIC12.46□□□□□ -0.41
Cldn13Q9Z0S4 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Cldn13Q9Z0S4 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cldn13Q9Z0S4 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
Cldn13Q9Z0S4 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cldn13Q9Z0S4 Gm13453-201ENSMUST00000118708 357 ntBASIC12.46□□□□□ -0.41
Cldn13Q9Z0S4 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC12.46□□□□□ -0.41
Cldn13Q9Z0S4 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cldn13Q9Z0S4 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC12.46□□□□□ -0.41
Cldn13Q9Z0S4 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Cldn13Q9Z0S4 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Cldn13Q9Z0S4 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cldn13Q9Z0S4 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cldn13Q9Z0S4 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cldn13Q9Z0S4 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cldn13Q9Z0S4 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cldn13Q9Z0S4 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC12.46□□□□□ -0.41
Cldn13Q9Z0S4 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cldn13Q9Z0S4 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cldn13Q9Z0S4 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Cldn13Q9Z0S4 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cldn13Q9Z0S4 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cldn13Q9Z0S4 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cldn13Q9Z0S4 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Cldn13Q9Z0S4 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Cldn13Q9Z0S4 AC121801.1-201ENSMUST00000225363 1899 ntBASIC12.46□□□□□ -0.42
Cldn13Q9Z0S4 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC12.46□□□□□ -0.42
Cldn13Q9Z0S4 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC12.46□□□□□ -0.42
Cldn13Q9Z0S4 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cldn13Q9Z0S4 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC12.46□□□□□ -0.42
Cldn13Q9Z0S4 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cldn13Q9Z0S4 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Cldn13Q9Z0S4 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.46□□□□□ -0.42
Cldn13Q9Z0S4 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.46□□□□□ -0.42
Cldn13Q9Z0S4 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cldn13Q9Z0S4 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms