Protein–RNA interactions for Protein: Q9WUH2

Lhx9, LIM/homeobox protein Lhx9, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx9Q9WUH2 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lhx9Q9WUH2 Gm11478-201ENSMUST00000117851 599 ntBASIC13.27□□□□□ -0.29
Lhx9Q9WUH2 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lhx9Q9WUH2 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
Lhx9Q9WUH2 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Lhx9Q9WUH2 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC13.27□□□□□ -0.29
Lhx9Q9WUH2 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC13.27□□□□□ -0.29
Lhx9Q9WUH2 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC13.27□□□□□ -0.29
Lhx9Q9WUH2 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lhx9Q9WUH2 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lhx9Q9WUH2 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Lhx9Q9WUH2 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
Lhx9Q9WUH2 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lhx9Q9WUH2 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lhx9Q9WUH2 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lhx9Q9WUH2 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lhx9Q9WUH2 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lhx9Q9WUH2 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lhx9Q9WUH2 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lhx9Q9WUH2 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Lhx9Q9WUH2 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.27□□□□□ -0.29
Lhx9Q9WUH2 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lhx9Q9WUH2 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lhx9Q9WUH2 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lhx9Q9WUH2 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC13.26□□□□□ -0.29
Lhx9Q9WUH2 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Lhx9Q9WUH2 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Lhx9Q9WUH2 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Lhx9Q9WUH2 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.26□□□□□ -0.29
Lhx9Q9WUH2 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lhx9Q9WUH2 Gm6912-201ENSMUST00000117218 544 ntBASIC13.26□□□□□ -0.29
Lhx9Q9WUH2 Gm12138-201ENSMUST00000122180 951 ntBASIC13.26□□□□□ -0.29
Lhx9Q9WUH2 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lhx9Q9WUH2 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC13.26□□□□□ -0.29
Lhx9Q9WUH2 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC13.26□□□□□ -0.29
Lhx9Q9WUH2 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Lhx9Q9WUH2 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.26□□□□□ -0.29
Lhx9Q9WUH2 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Lhx9Q9WUH2 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.26□□□□□ -0.29
Lhx9Q9WUH2 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Lhx9Q9WUH2 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Lhx9Q9WUH2 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lhx9Q9WUH2 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Lhx9Q9WUH2 Gm37714-201ENSMUST00000194742 342 ntBASIC13.26□□□□□ -0.29
Lhx9Q9WUH2 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Lhx9Q9WUH2 Gm43438-201ENSMUST00000198133 379 ntBASIC13.26□□□□□ -0.29
Lhx9Q9WUH2 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13.26□□□□□ -0.29
Lhx9Q9WUH2 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC13.26□□□□□ -0.29
Lhx9Q9WUH2 Gm19220-201ENSMUST00000222682 803 ntBASIC13.26□□□□□ -0.29
Lhx9Q9WUH2 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.26□□□□□ -0.29
Lhx9Q9WUH2 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.26□□□□□ -0.29
Lhx9Q9WUH2 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lhx9Q9WUH2 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lhx9Q9WUH2 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lhx9Q9WUH2 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lhx9Q9WUH2 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Lhx9Q9WUH2 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Lhx9Q9WUH2 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lhx9Q9WUH2 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lhx9Q9WUH2 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lhx9Q9WUH2 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Lhx9Q9WUH2 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lhx9Q9WUH2 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Lhx9Q9WUH2 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lhx9Q9WUH2 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lhx9Q9WUH2 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lhx9Q9WUH2 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lhx9Q9WUH2 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lhx9Q9WUH2 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lhx9Q9WUH2 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Lhx9Q9WUH2 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lhx9Q9WUH2 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lhx9Q9WUH2 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lhx9Q9WUH2 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lhx9Q9WUH2 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.25□□□□□ -0.29
Lhx9Q9WUH2 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Lhx9Q9WUH2 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Lhx9Q9WUH2 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lhx9Q9WUH2 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lhx9Q9WUH2 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lhx9Q9WUH2 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Lhx9Q9WUH2 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Lhx9Q9WUH2 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC13.25□□□□□ -0.29
Lhx9Q9WUH2 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Lhx9Q9WUH2 Mir6392-201ENSMUST00000184924 108 ntBASIC13.25□□□□□ -0.29
Lhx9Q9WUH2 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.25□□□□□ -0.29
Lhx9Q9WUH2 Gm18027-201ENSMUST00000218947 619 ntBASIC13.25□□□□□ -0.29
Lhx9Q9WUH2 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.25□□□□□ -0.29
Lhx9Q9WUH2 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lhx9Q9WUH2 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lhx9Q9WUH2 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Lhx9Q9WUH2 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lhx9Q9WUH2 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lhx9Q9WUH2 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Lhx9Q9WUH2 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.25□□□□□ -0.29
Lhx9Q9WUH2 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Lhx9Q9WUH2 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lhx9Q9WUH2 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Lhx9Q9WUH2 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.25□□□□□ -0.29
Lhx9Q9WUH2 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms