Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ube3bQ9ES34 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ube3bQ9ES34 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ube3bQ9ES34 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Ube3bQ9ES34 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ube3bQ9ES34 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC16.56■□□□□ 0.24
Ube3bQ9ES34 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ube3bQ9ES34 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ube3bQ9ES34 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ube3bQ9ES34 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ube3bQ9ES34 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ube3bQ9ES34 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ube3bQ9ES34 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ube3bQ9ES34 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ube3bQ9ES34 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ube3bQ9ES34 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ube3bQ9ES34 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ube3bQ9ES34 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ube3bQ9ES34 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ube3bQ9ES34 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ube3bQ9ES34 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ube3bQ9ES34 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ube3bQ9ES34 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ube3bQ9ES34 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ube3bQ9ES34 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ube3bQ9ES34 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ube3bQ9ES34 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC16.55■□□□□ 0.24
Ube3bQ9ES34 Gm14730-201ENSMUST00000122378 1045 ntBASIC16.55■□□□□ 0.24
Ube3bQ9ES34 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC16.55■□□□□ 0.24
Ube3bQ9ES34 Gm27701-201ENSMUST00000184498 110 ntBASIC16.55■□□□□ 0.24
Ube3bQ9ES34 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ube3bQ9ES34 Gm7498-201ENSMUST00000203282 1084 ntBASIC16.55■□□□□ 0.24
Ube3bQ9ES34 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC16.55■□□□□ 0.24
Ube3bQ9ES34 AC162801.1-201ENSMUST00000220612 198 ntBASIC16.55■□□□□ 0.24
Ube3bQ9ES34 AC159006.1-201ENSMUST00000226396 258 ntBASIC16.55■□□□□ 0.24
Ube3bQ9ES34 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ube3bQ9ES34 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ube3bQ9ES34 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ube3bQ9ES34 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Ube3bQ9ES34 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ube3bQ9ES34 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Ube3bQ9ES34 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ube3bQ9ES34 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ube3bQ9ES34 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ube3bQ9ES34 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ube3bQ9ES34 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Ube3bQ9ES34 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC16.55■□□□□ 0.24
Ube3bQ9ES34 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ube3bQ9ES34 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ube3bQ9ES34 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ube3bQ9ES34 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ube3bQ9ES34 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ube3bQ9ES34 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ube3bQ9ES34 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ube3bQ9ES34 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ube3bQ9ES34 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ube3bQ9ES34 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ube3bQ9ES34 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ube3bQ9ES34 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Ube3bQ9ES34 Gm12485-201ENSMUST00000119641 291 ntBASIC16.54■□□□□ 0.24
Ube3bQ9ES34 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ube3bQ9ES34 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC16.54■□□□□ 0.24
Ube3bQ9ES34 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC16.54■□□□□ 0.24
Ube3bQ9ES34 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ube3bQ9ES34 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC16.54■□□□□ 0.24
Ube3bQ9ES34 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC16.54■□□□□ 0.24
Ube3bQ9ES34 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ube3bQ9ES34 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ube3bQ9ES34 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ube3bQ9ES34 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ube3bQ9ES34 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ube3bQ9ES34 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ube3bQ9ES34 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ube3bQ9ES34 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ube3bQ9ES34 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ube3bQ9ES34 Gm44443-201ENSMUST00000204396 5633 ntBASIC16.54■□□□□ 0.24
Ube3bQ9ES34 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ube3bQ9ES34 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ube3bQ9ES34 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ube3bQ9ES34 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ube3bQ9ES34 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ube3bQ9ES34 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC16.54■□□□□ 0.24
Ube3bQ9ES34 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC16.53■□□□□ 0.24
Ube3bQ9ES34 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Ube3bQ9ES34 AC167013.2-201ENSMUST00000228520 2684 ntBASIC16.53■□□□□ 0.24
Ube3bQ9ES34 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ube3bQ9ES34 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ube3bQ9ES34 Gm21038-201ENSMUST00000222205 1383 ntBASIC16.53■□□□□ 0.24
Ube3bQ9ES34 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ube3bQ9ES34 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ube3bQ9ES34 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ube3bQ9ES34 Gm15163-201ENSMUST00000120749 1302 ntBASIC16.53■□□□□ 0.24
Ube3bQ9ES34 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ube3bQ9ES34 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ube3bQ9ES34 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Ube3bQ9ES34 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ube3bQ9ES34 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC16.53■□□□□ 0.24
Ube3bQ9ES34 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ube3bQ9ES34 Gm18934-201ENSMUST00000216671 1044 ntBASIC16.53■□□□□ 0.24
Ube3bQ9ES34 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC16.53■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms