Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ube4bQ9ES00 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ube4bQ9ES00 Paupar-201ENSMUST00000194826 3482 ntBASIC13.41□□□□□ -0.26
Ube4bQ9ES00 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ube4bQ9ES00 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC13.41□□□□□ -0.26
Ube4bQ9ES00 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC13.41□□□□□ -0.26
Ube4bQ9ES00 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC13.41□□□□□ -0.26
Ube4bQ9ES00 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ube4bQ9ES00 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC13.41□□□□□ -0.26
Ube4bQ9ES00 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ube4bQ9ES00 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ube4bQ9ES00 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ube4bQ9ES00 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ube4bQ9ES00 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ube4bQ9ES00 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ube4bQ9ES00 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ube4bQ9ES00 Gm20633-201ENSMUST00000176742 2831 ntBASIC13.41□□□□□ -0.26
Ube4bQ9ES00 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ube4bQ9ES00 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ube4bQ9ES00 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ube4bQ9ES00 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ube4bQ9ES00 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ube4bQ9ES00 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Ube4bQ9ES00 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC13.41□□□□□ -0.26
Ube4bQ9ES00 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ube4bQ9ES00 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ube4bQ9ES00 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Ube4bQ9ES00 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Ube4bQ9ES00 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ube4bQ9ES00 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ube4bQ9ES00 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ube4bQ9ES00 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ube4bQ9ES00 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
Ube4bQ9ES00 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Ube4bQ9ES00 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ube4bQ9ES00 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Ube4bQ9ES00 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ube4bQ9ES00 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC13.4□□□□□ -0.26
Ube4bQ9ES00 Gm13418-201ENSMUST00000119097 944 ntBASIC13.4□□□□□ -0.26
Ube4bQ9ES00 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
Ube4bQ9ES00 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC13.4□□□□□ -0.26
Ube4bQ9ES00 Gm10459-201ENSMUST00000202708 1155 ntBASIC13.4□□□□□ -0.26
Ube4bQ9ES00 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC13.4□□□□□ -0.26
Ube4bQ9ES00 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ube4bQ9ES00 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Ube4bQ9ES00 Mbnl2-204ENSMUST00000227012 2390 ntBASIC13.4□□□□□ -0.26
Ube4bQ9ES00 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ube4bQ9ES00 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
Ube4bQ9ES00 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Ube4bQ9ES00 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC13.4□□□□□ -0.26
Ube4bQ9ES00 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Ube4bQ9ES00 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ube4bQ9ES00 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Ube4bQ9ES00 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC13.4□□□□□ -0.26
Ube4bQ9ES00 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ube4bQ9ES00 Nudt18-203ENSMUST00000228768 1578 ntBASIC13.4□□□□□ -0.26
Ube4bQ9ES00 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ube4bQ9ES00 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ube4bQ9ES00 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ube4bQ9ES00 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ube4bQ9ES00 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ube4bQ9ES00 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ube4bQ9ES00 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Ube4bQ9ES00 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ube4bQ9ES00 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ube4bQ9ES00 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ube4bQ9ES00 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ube4bQ9ES00 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ube4bQ9ES00 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ube4bQ9ES00 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ube4bQ9ES00 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ube4bQ9ES00 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ube4bQ9ES00 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ube4bQ9ES00 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ube4bQ9ES00 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ube4bQ9ES00 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ube4bQ9ES00 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ube4bQ9ES00 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC13.39□□□□□ -0.27
Ube4bQ9ES00 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC13.39□□□□□ -0.27
Ube4bQ9ES00 Gm2308-201ENSMUST00000166539 1004 ntBASIC13.39□□□□□ -0.27
Ube4bQ9ES00 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC13.39□□□□□ -0.27
Ube4bQ9ES00 Gm44357-201ENSMUST00000195897 142 ntBASIC13.39□□□□□ -0.27
Ube4bQ9ES00 Gm19658-201ENSMUST00000196231 138 ntBASIC13.39□□□□□ -0.27
Ube4bQ9ES00 Gm44367-201ENSMUST00000196836 138 ntBASIC13.39□□□□□ -0.27
Ube4bQ9ES00 Gm44350-201ENSMUST00000197197 138 ntBASIC13.39□□□□□ -0.27
Ube4bQ9ES00 Gm44390-201ENSMUST00000197533 144 ntBASIC13.39□□□□□ -0.27
Ube4bQ9ES00 Gm6089-201ENSMUST00000197666 938 ntBASIC13.39□□□□□ -0.27
Ube4bQ9ES00 Gm44313-201ENSMUST00000198018 138 ntBASIC13.39□□□□□ -0.27
Ube4bQ9ES00 Gm44486-201ENSMUST00000198508 138 ntBASIC13.39□□□□□ -0.27
Ube4bQ9ES00 Gm44314-201ENSMUST00000199263 138 ntBASIC13.39□□□□□ -0.27
Ube4bQ9ES00 Gm44394-201ENSMUST00000199558 138 ntBASIC13.39□□□□□ -0.27
Ube4bQ9ES00 Gm44484-201ENSMUST00000199873 138 ntBASIC13.39□□□□□ -0.27
Ube4bQ9ES00 Gm44466-201ENSMUST00000200264 138 ntBASIC13.39□□□□□ -0.27
Ube4bQ9ES00 Gm44359-201ENSMUST00000200671 138 ntBASIC13.39□□□□□ -0.27
Ube4bQ9ES00 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC13.39□□□□□ -0.27
Ube4bQ9ES00 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC13.39□□□□□ -0.27
Ube4bQ9ES00 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ube4bQ9ES00 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ube4bQ9ES00 Gm37105-201ENSMUST00000192251 2085 ntBASIC13.39□□□□□ -0.27
Ube4bQ9ES00 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms