Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cpsf1Q9EPU4 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cpsf1Q9EPU4 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.06■□□□□ 0.64
Cpsf1Q9EPU4 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Cpsf1Q9EPU4 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cpsf1Q9EPU4 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cpsf1Q9EPU4 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cpsf1Q9EPU4 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cpsf1Q9EPU4 Gm38197-201ENSMUST00000192320 2122 ntBASIC19.06■□□□□ 0.64
Cpsf1Q9EPU4 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC19.06■□□□□ 0.64
Cpsf1Q9EPU4 Gm42929-201ENSMUST00000198374 1286 ntBASIC19.06■□□□□ 0.64
Cpsf1Q9EPU4 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cpsf1Q9EPU4 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cpsf1Q9EPU4 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cpsf1Q9EPU4 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cpsf1Q9EPU4 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Cpsf1Q9EPU4 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Cpsf1Q9EPU4 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cpsf1Q9EPU4 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Cpsf1Q9EPU4 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cpsf1Q9EPU4 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cpsf1Q9EPU4 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cpsf1Q9EPU4 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cpsf1Q9EPU4 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC19.05■□□□□ 0.64
Cpsf1Q9EPU4 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Cpsf1Q9EPU4 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Cpsf1Q9EPU4 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cpsf1Q9EPU4 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cpsf1Q9EPU4 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cpsf1Q9EPU4 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cpsf1Q9EPU4 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cpsf1Q9EPU4 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cpsf1Q9EPU4 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cpsf1Q9EPU4 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Cpsf1Q9EPU4 Ankra2-208ENSMUST00000226100 1476 ntBASIC19.05■□□□□ 0.64
Cpsf1Q9EPU4 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cpsf1Q9EPU4 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Cpsf1Q9EPU4 Gm14660-201ENSMUST00000119809 575 ntBASIC19.05■□□□□ 0.64
Cpsf1Q9EPU4 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC19.05■□□□□ 0.64
Cpsf1Q9EPU4 Mir1982-201ENSMUST00000157368 74 ntBASIC19.05■□□□□ 0.64
Cpsf1Q9EPU4 Snora78-201ENSMUST00000158630 128 ntBASIC19.05■□□□□ 0.64
Cpsf1Q9EPU4 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cpsf1Q9EPU4 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cpsf1Q9EPU4 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Cpsf1Q9EPU4 Proscos-202ENSMUST00000178990 666 ntBASIC19.05■□□□□ 0.64
Cpsf1Q9EPU4 Gm42550-201ENSMUST00000201553 960 ntBASIC19.05■□□□□ 0.64
Cpsf1Q9EPU4 Gm44799-201ENSMUST00000207639 1202 ntBASIC19.05■□□□□ 0.64
Cpsf1Q9EPU4 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC19.05■□□□□ 0.64
Cpsf1Q9EPU4 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cpsf1Q9EPU4 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC19.05■□□□□ 0.64
Cpsf1Q9EPU4 Gm37133-201ENSMUST00000192705 1922 ntBASIC19.05■□□□□ 0.64
Cpsf1Q9EPU4 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Cpsf1Q9EPU4 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Cpsf1Q9EPU4 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Cpsf1Q9EPU4 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cpsf1Q9EPU4 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC19.04■□□□□ 0.64
Cpsf1Q9EPU4 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cpsf1Q9EPU4 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cpsf1Q9EPU4 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cpsf1Q9EPU4 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Cpsf1Q9EPU4 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Cpsf1Q9EPU4 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC19.04■□□□□ 0.64
Cpsf1Q9EPU4 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC19.04■□□□□ 0.64
Cpsf1Q9EPU4 Gm11803-201ENSMUST00000119966 444 ntBASIC19.04■□□□□ 0.64
Cpsf1Q9EPU4 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC19.04■□□□□ 0.64
Cpsf1Q9EPU4 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cpsf1Q9EPU4 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cpsf1Q9EPU4 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cpsf1Q9EPU4 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cpsf1Q9EPU4 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cpsf1Q9EPU4 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cpsf1Q9EPU4 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cpsf1Q9EPU4 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cpsf1Q9EPU4 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Cpsf1Q9EPU4 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cpsf1Q9EPU4 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Cpsf1Q9EPU4 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
Cpsf1Q9EPU4 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Cpsf1Q9EPU4 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Cpsf1Q9EPU4 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cpsf1Q9EPU4 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC19.03■□□□□ 0.64
Cpsf1Q9EPU4 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cpsf1Q9EPU4 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cpsf1Q9EPU4 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cpsf1Q9EPU4 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cpsf1Q9EPU4 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Cpsf1Q9EPU4 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cpsf1Q9EPU4 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cpsf1Q9EPU4 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Cpsf1Q9EPU4 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC19.03■□□□□ 0.64
Cpsf1Q9EPU4 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC19.03■□□□□ 0.64
Cpsf1Q9EPU4 AC166349.1-201ENSMUST00000220866 695 ntBASIC19.03■□□□□ 0.64
Cpsf1Q9EPU4 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cpsf1Q9EPU4 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cpsf1Q9EPU4 Rn7sk-201ENSMUST00000083103 331 ntBASIC19.03■□□□□ 0.64
Cpsf1Q9EPU4 Gm26315-201ENSMUST00000083890 321 ntBASIC19.03■□□□□ 0.64
Cpsf1Q9EPU4 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cpsf1Q9EPU4 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cpsf1Q9EPU4 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cpsf1Q9EPU4 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms