Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdc40Q9DC48 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cdc40Q9DC48 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC12.99□□□□□ -0.33
Cdc40Q9DC48 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Cdc40Q9DC48 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdc40Q9DC48 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdc40Q9DC48 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Cdc40Q9DC48 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC12.99□□□□□ -0.33
Cdc40Q9DC48 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC12.99□□□□□ -0.33
Cdc40Q9DC48 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC12.99□□□□□ -0.33
Cdc40Q9DC48 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC12.99□□□□□ -0.33
Cdc40Q9DC48 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC12.99□□□□□ -0.33
Cdc40Q9DC48 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC12.99□□□□□ -0.33
Cdc40Q9DC48 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC12.99□□□□□ -0.33
Cdc40Q9DC48 Gm27680-201ENSMUST00000184192 160 ntBASIC12.99□□□□□ -0.33
Cdc40Q9DC48 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdc40Q9DC48 Gm46209-201ENSMUST00000217912 553 ntBASIC12.99□□□□□ -0.33
Cdc40Q9DC48 Gm7775-201ENSMUST00000218871 853 ntBASIC12.99□□□□□ -0.33
Cdc40Q9DC48 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC12.99□□□□□ -0.33
Cdc40Q9DC48 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdc40Q9DC48 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdc40Q9DC48 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdc40Q9DC48 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdc40Q9DC48 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdc40Q9DC48 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdc40Q9DC48 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Cdc40Q9DC48 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC12.99□□□□□ -0.33
Cdc40Q9DC48 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Cdc40Q9DC48 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cdc40Q9DC48 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC12.99□□□□□ -0.33
Cdc40Q9DC48 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdc40Q9DC48 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Cdc40Q9DC48 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdc40Q9DC48 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC12.99□□□□□ -0.33
Cdc40Q9DC48 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cdc40Q9DC48 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdc40Q9DC48 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdc40Q9DC48 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cdc40Q9DC48 Mmp14-206ENSMUST00000225641 3238 ntBASIC12.98□□□□□ -0.33
Cdc40Q9DC48 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdc40Q9DC48 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cdc40Q9DC48 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cdc40Q9DC48 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Cdc40Q9DC48 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdc40Q9DC48 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdc40Q9DC48 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdc40Q9DC48 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Cdc40Q9DC48 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cdc40Q9DC48 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdc40Q9DC48 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdc40Q9DC48 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdc40Q9DC48 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cdc40Q9DC48 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Cdc40Q9DC48 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Cdc40Q9DC48 Gm14719-201ENSMUST00000121891 340 ntBASIC12.98□□□□□ -0.33
Cdc40Q9DC48 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC12.98□□□□□ -0.33
Cdc40Q9DC48 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC12.98□□□□□ -0.33
Cdc40Q9DC48 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdc40Q9DC48 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdc40Q9DC48 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cdc40Q9DC48 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cdc40Q9DC48 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdc40Q9DC48 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Cdc40Q9DC48 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC12.98□□□□□ -0.33
Cdc40Q9DC48 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cdc40Q9DC48 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Cdc40Q9DC48 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Cdc40Q9DC48 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdc40Q9DC48 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC12.98□□□□□ -0.33
Cdc40Q9DC48 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdc40Q9DC48 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdc40Q9DC48 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdc40Q9DC48 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdc40Q9DC48 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Cdc40Q9DC48 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
Cdc40Q9DC48 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdc40Q9DC48 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Cdc40Q9DC48 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdc40Q9DC48 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdc40Q9DC48 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdc40Q9DC48 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdc40Q9DC48 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC12.97□□□□□ -0.33
Cdc40Q9DC48 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdc40Q9DC48 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Cdc40Q9DC48 Syt7-204ENSMUST00000223586 1344 ntBASIC12.97□□□□□ -0.33
Cdc40Q9DC48 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdc40Q9DC48 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdc40Q9DC48 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cdc40Q9DC48 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdc40Q9DC48 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdc40Q9DC48 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC12.97□□□□□ -0.33
Cdc40Q9DC48 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC12.97□□□□□ -0.33
Cdc40Q9DC48 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
Cdc40Q9DC48 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cdc40Q9DC48 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdc40Q9DC48 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Cdc40Q9DC48 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cdc40Q9DC48 Gm27838-201ENSMUST00000184829 128 ntBASIC12.97□□□□□ -0.33
Cdc40Q9DC48 Gm29310-201ENSMUST00000185468 696 ntBASIC12.97□□□□□ -0.33
Cdc40Q9DC48 Gm21825-201ENSMUST00000185728 696 ntBASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms