Protein–RNA interactions for Protein: Q9D541

Ccdc7, Coiled-coil domain-containing protein 7, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc7Q9D541 Gm4971-201ENSMUST00000205991 1108 ntBASIC16.33■□□□□ 0.2
Ccdc7Q9D541 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc7Q9D541 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc7Q9D541 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc7Q9D541 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc7Q9D541 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc7Q9D541 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc7Q9D541 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc7Q9D541 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc7Q9D541 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Ccdc7Q9D541 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc7Q9D541 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc7Q9D541 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc7Q9D541 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc7Q9D541 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc7Q9D541 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc7Q9D541 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc7Q9D541 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc7Q9D541 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc7Q9D541 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc7Q9D541 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc7Q9D541 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc7Q9D541 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Ccdc7Q9D541 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc7Q9D541 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc7Q9D541 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC16.32■□□□□ 0.2
Ccdc7Q9D541 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc7Q9D541 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC16.32■□□□□ 0.2
Ccdc7Q9D541 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC16.32■□□□□ 0.2
Ccdc7Q9D541 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc7Q9D541 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Ccdc7Q9D541 CT943659.1-201ENSMUST00000215459 326 ntBASIC16.32■□□□□ 0.2
Ccdc7Q9D541 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc7Q9D541 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc7Q9D541 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc7Q9D541 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc7Q9D541 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc7Q9D541 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Ccdc7Q9D541 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc7Q9D541 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc7Q9D541 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc7Q9D541 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Ccdc7Q9D541 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc7Q9D541 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc7Q9D541 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC16.32■□□□□ 0.2
Ccdc7Q9D541 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc7Q9D541 Grk6-205ENSMUST00000224653 2976 ntBASIC16.32■□□□□ 0.2
Ccdc7Q9D541 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc7Q9D541 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc7Q9D541 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc7Q9D541 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc7Q9D541 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc7Q9D541 AC154725.1-201ENSMUST00000224826 1961 ntBASIC16.31■□□□□ 0.2
Ccdc7Q9D541 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc7Q9D541 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc7Q9D541 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc7Q9D541 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc7Q9D541 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC16.31■□□□□ 0.2
Ccdc7Q9D541 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC16.31■□□□□ 0.2
Ccdc7Q9D541 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Ccdc7Q9D541 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc7Q9D541 Gm24543-201ENSMUST00000103867 82 ntBASIC16.31■□□□□ 0.2
Ccdc7Q9D541 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc7Q9D541 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc7Q9D541 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc7Q9D541 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
Ccdc7Q9D541 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC16.31■□□□□ 0.2
Ccdc7Q9D541 Gm43514-201ENSMUST00000198852 424 ntBASIC16.31■□□□□ 0.2
Ccdc7Q9D541 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc7Q9D541 AC121804.3-201ENSMUST00000223420 295 ntBASIC16.31■□□□□ 0.2
Ccdc7Q9D541 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Ccdc7Q9D541 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc7Q9D541 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc7Q9D541 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc7Q9D541 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc7Q9D541 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc7Q9D541 Gm28386-201ENSMUST00000189147 1849 ntBASIC16.31■□□□□ 0.2
Ccdc7Q9D541 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc7Q9D541 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc7Q9D541 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc7Q9D541 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC16.3■□□□□ 0.2
Ccdc7Q9D541 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc7Q9D541 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc7Q9D541 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc7Q9D541 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Ccdc7Q9D541 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc7Q9D541 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Ccdc7Q9D541 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc7Q9D541 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Ccdc7Q9D541 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc7Q9D541 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc7Q9D541 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc7Q9D541 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc7Q9D541 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc7Q9D541 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc7Q9D541 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Ccdc7Q9D541 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc7Q9D541 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC16.3■□□□□ 0.2
Ccdc7Q9D541 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Ccdc7Q9D541 Ighv1-51-201ENSMUST00000192903 354 ntBASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms