Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trim13Q9CYB0 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim13Q9CYB0 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim13Q9CYB0 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim13Q9CYB0 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim13Q9CYB0 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim13Q9CYB0 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim13Q9CYB0 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim13Q9CYB0 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim13Q9CYB0 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim13Q9CYB0 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim13Q9CYB0 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim13Q9CYB0 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim13Q9CYB0 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim13Q9CYB0 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim13Q9CYB0 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim13Q9CYB0 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim13Q9CYB0 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Trim13Q9CYB0 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim13Q9CYB0 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Trim13Q9CYB0 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim13Q9CYB0 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim13Q9CYB0 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim13Q9CYB0 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim13Q9CYB0 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim13Q9CYB0 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim13Q9CYB0 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC12.9□□□□□ -0.34
Trim13Q9CYB0 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim13Q9CYB0 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim13Q9CYB0 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Trim13Q9CYB0 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC12.9□□□□□ -0.34
Trim13Q9CYB0 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim13Q9CYB0 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim13Q9CYB0 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC12.9□□□□□ -0.34
Trim13Q9CYB0 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim13Q9CYB0 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC12.9□□□□□ -0.34
Trim13Q9CYB0 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC12.9□□□□□ -0.34
Trim13Q9CYB0 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC12.9□□□□□ -0.34
Trim13Q9CYB0 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim13Q9CYB0 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim13Q9CYB0 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim13Q9CYB0 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim13Q9CYB0 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Trim13Q9CYB0 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim13Q9CYB0 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim13Q9CYB0 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim13Q9CYB0 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim13Q9CYB0 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim13Q9CYB0 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Trim13Q9CYB0 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim13Q9CYB0 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim13Q9CYB0 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
Trim13Q9CYB0 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trim13Q9CYB0 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Trim13Q9CYB0 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.89□□□□□ -0.35
Trim13Q9CYB0 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim13Q9CYB0 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim13Q9CYB0 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trim13Q9CYB0 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Trim13Q9CYB0 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Trim13Q9CYB0 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC12.89□□□□□ -0.35
Trim13Q9CYB0 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.89□□□□□ -0.35
Trim13Q9CYB0 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim13Q9CYB0 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trim13Q9CYB0 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.89□□□□□ -0.35
Trim13Q9CYB0 Gm16198-201ENSMUST00000118766 670 ntBASIC12.89□□□□□ -0.35
Trim13Q9CYB0 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trim13Q9CYB0 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC12.89□□□□□ -0.35
Trim13Q9CYB0 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC12.89□□□□□ -0.35
Trim13Q9CYB0 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Trim13Q9CYB0 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC12.89□□□□□ -0.35
Trim13Q9CYB0 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC12.89□□□□□ -0.35
Trim13Q9CYB0 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim13Q9CYB0 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim13Q9CYB0 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC12.89□□□□□ -0.35
Trim13Q9CYB0 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim13Q9CYB0 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim13Q9CYB0 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trim13Q9CYB0 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Trim13Q9CYB0 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim13Q9CYB0 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim13Q9CYB0 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trim13Q9CYB0 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.89□□□□□ -0.35
Trim13Q9CYB0 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.89□□□□□ -0.35
Trim13Q9CYB0 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim13Q9CYB0 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.88□□□□□ -0.35
Trim13Q9CYB0 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim13Q9CYB0 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trim13Q9CYB0 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim13Q9CYB0 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.88□□□□□ -0.35
Trim13Q9CYB0 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim13Q9CYB0 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Trim13Q9CYB0 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim13Q9CYB0 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.88□□□□□ -0.35
Trim13Q9CYB0 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.88□□□□□ -0.35
Trim13Q9CYB0 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trim13Q9CYB0 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim13Q9CYB0 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim13Q9CYB0 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trim13Q9CYB0 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms