Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
Chd1lQ9CXF7 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chd1lQ9CXF7 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC15.78■□□□□ 0.12
Chd1lQ9CXF7 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chd1lQ9CXF7 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Chd1lQ9CXF7 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC15.78■□□□□ 0.12
Chd1lQ9CXF7 AC131690.1-201ENSMUST00000218406 374 ntBASIC15.78■□□□□ 0.12
Chd1lQ9CXF7 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chd1lQ9CXF7 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Chd1lQ9CXF7 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chd1lQ9CXF7 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chd1lQ9CXF7 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chd1lQ9CXF7 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Chd1lQ9CXF7 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Chd1lQ9CXF7 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chd1lQ9CXF7 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC15.78■□□□□ 0.12
Chd1lQ9CXF7 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chd1lQ9CXF7 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Chd1lQ9CXF7 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Chd1lQ9CXF7 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Chd1lQ9CXF7 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC15.77■□□□□ 0.12
Chd1lQ9CXF7 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Chd1lQ9CXF7 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC15.77■□□□□ 0.12
Chd1lQ9CXF7 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Chd1lQ9CXF7 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Chd1lQ9CXF7 Gm27196-201ENSMUST00000184787 2582 ntBASIC15.77■□□□□ 0.12
Chd1lQ9CXF7 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Chd1lQ9CXF7 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Chd1lQ9CXF7 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Chd1lQ9CXF7 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Chd1lQ9CXF7 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC15.77■□□□□ 0.12
Chd1lQ9CXF7 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC15.77■□□□□ 0.12
Chd1lQ9CXF7 Gm15483-201ENSMUST00000120338 456 ntBASIC15.77■□□□□ 0.12
Chd1lQ9CXF7 Gm6184-201ENSMUST00000120403 1261 ntBASIC15.77■□□□□ 0.12
Chd1lQ9CXF7 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Chd1lQ9CXF7 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC15.77■□□□□ 0.12
Chd1lQ9CXF7 Gm27459-201ENSMUST00000184860 107 ntBASIC15.77■□□□□ 0.12
Chd1lQ9CXF7 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC15.77■□□□□ 0.12
Chd1lQ9CXF7 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Chd1lQ9CXF7 Gm42670-201ENSMUST00000201816 1292 ntBASIC15.77■□□□□ 0.12
Chd1lQ9CXF7 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Chd1lQ9CXF7 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.12
Chd1lQ9CXF7 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Chd1lQ9CXF7 AV026068-213ENSMUST00000223675 1171 ntBASIC15.77■□□□□ 0.12
Chd1lQ9CXF7 AC123645.1-201ENSMUST00000228469 605 ntBASIC15.77■□□□□ 0.12
Chd1lQ9CXF7 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Chd1lQ9CXF7 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Chd1lQ9CXF7 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Chd1lQ9CXF7 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Chd1lQ9CXF7 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Chd1lQ9CXF7 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Chd1lQ9CXF7 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC15.77■□□□□ 0.11
Chd1lQ9CXF7 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Chd1lQ9CXF7 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Chd1lQ9CXF7 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Chd1lQ9CXF7 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Chd1lQ9CXF7 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Chd1lQ9CXF7 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Chd1lQ9CXF7 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC15.76■□□□□ 0.11
Chd1lQ9CXF7 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Chd1lQ9CXF7 Mir7071-201ENSMUST00000184847 69 ntBASIC15.76■□□□□ 0.11
Chd1lQ9CXF7 Gm5712-201ENSMUST00000199748 1043 ntBASIC15.76■□□□□ 0.11
Chd1lQ9CXF7 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Chd1lQ9CXF7 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Chd1lQ9CXF7 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
Chd1lQ9CXF7 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Chd1lQ9CXF7 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Chd1lQ9CXF7 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Chd1lQ9CXF7 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Chd1lQ9CXF7 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Chd1lQ9CXF7 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Chd1lQ9CXF7 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Chd1lQ9CXF7 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC15.75■□□□□ 0.11
Chd1lQ9CXF7 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Chd1lQ9CXF7 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Chd1lQ9CXF7 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Chd1lQ9CXF7 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Chd1lQ9CXF7 Gm13036-201ENSMUST00000117799 748 ntBASIC15.75■□□□□ 0.11
Chd1lQ9CXF7 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Chd1lQ9CXF7 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC15.75■□□□□ 0.11
Chd1lQ9CXF7 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Chd1lQ9CXF7 Birc2-201ENSMUST00000054878 378 ntBASIC15.75■□□□□ 0.11
Chd1lQ9CXF7 Rps4l-201ENSMUST00000071745 943 ntBASIC15.75■□□□□ 0.11
Chd1lQ9CXF7 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC15.75■□□□□ 0.11
Chd1lQ9CXF7 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Chd1lQ9CXF7 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
Chd1lQ9CXF7 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Chd1lQ9CXF7 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Chd1lQ9CXF7 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Chd1lQ9CXF7 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Chd1lQ9CXF7 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Chd1lQ9CXF7 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Chd1lQ9CXF7 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Chd1lQ9CXF7 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Chd1lQ9CXF7 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Chd1lQ9CXF7 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Chd1lQ9CXF7 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chd1lQ9CXF7 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC15.74■□□□□ 0.11
Chd1lQ9CXF7 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chd1lQ9CXF7 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms