Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC14.37□□□□□ -0.11
Ddx47Q9CWX9 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ddx47Q9CWX9 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Ddx47Q9CWX9 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC14.37□□□□□ -0.11
Ddx47Q9CWX9 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ddx47Q9CWX9 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ddx47Q9CWX9 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Ddx47Q9CWX9 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ddx47Q9CWX9 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ddx47Q9CWX9 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ddx47Q9CWX9 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ddx47Q9CWX9 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Ddx47Q9CWX9 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ddx47Q9CWX9 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ddx47Q9CWX9 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ddx47Q9CWX9 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC14.36□□□□□ -0.11
Ddx47Q9CWX9 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ddx47Q9CWX9 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ddx47Q9CWX9 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ddx47Q9CWX9 Gm38355-201ENSMUST00000192514 1570 ntBASIC14.36□□□□□ -0.11
Ddx47Q9CWX9 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ddx47Q9CWX9 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ddx47Q9CWX9 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC14.36□□□□□ -0.11
Ddx47Q9CWX9 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Ddx47Q9CWX9 Gm7230-201ENSMUST00000173026 815 ntBASIC14.36□□□□□ -0.11
Ddx47Q9CWX9 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC14.36□□□□□ -0.11
Ddx47Q9CWX9 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Ddx47Q9CWX9 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.36□□□□□ -0.11
Ddx47Q9CWX9 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ddx47Q9CWX9 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ddx47Q9CWX9 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ddx47Q9CWX9 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ddx47Q9CWX9 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ddx47Q9CWX9 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ddx47Q9CWX9 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ddx47Q9CWX9 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ddx47Q9CWX9 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC14.36□□□□□ -0.11
Ddx47Q9CWX9 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ddx47Q9CWX9 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ddx47Q9CWX9 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ddx47Q9CWX9 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ddx47Q9CWX9 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx47Q9CWX9 Gm44891-201ENSMUST00000208817 2223 ntBASIC14.35□□□□□ -0.11
Ddx47Q9CWX9 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx47Q9CWX9 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx47Q9CWX9 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx47Q9CWX9 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx47Q9CWX9 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx47Q9CWX9 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx47Q9CWX9 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx47Q9CWX9 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx47Q9CWX9 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx47Q9CWX9 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx47Q9CWX9 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Ddx47Q9CWX9 AC154725.1-201ENSMUST00000224826 1961 ntBASIC14.35□□□□□ -0.11
Ddx47Q9CWX9 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx47Q9CWX9 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx47Q9CWX9 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx47Q9CWX9 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx47Q9CWX9 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Ddx47Q9CWX9 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx47Q9CWX9 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx47Q9CWX9 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC14.35□□□□□ -0.11
Ddx47Q9CWX9 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.35□□□□□ -0.11
Ddx47Q9CWX9 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC14.35□□□□□ -0.11
Ddx47Q9CWX9 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.35□□□□□ -0.11
Ddx47Q9CWX9 AC123645.1-201ENSMUST00000228469 605 ntBASIC14.35□□□□□ -0.11
Ddx47Q9CWX9 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx47Q9CWX9 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx47Q9CWX9 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.35□□□□□ -0.11
Ddx47Q9CWX9 Gm10154-201ENSMUST00000084445 354 ntBASIC14.35□□□□□ -0.11
Ddx47Q9CWX9 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx47Q9CWX9 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Ddx47Q9CWX9 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx47Q9CWX9 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx47Q9CWX9 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx47Q9CWX9 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx47Q9CWX9 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx47Q9CWX9 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC14.35□□□□□ -0.11
Ddx47Q9CWX9 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx47Q9CWX9 Gm27194-201ENSMUST00000175753 2936 ntBASIC14.35□□□□□ -0.11
Ddx47Q9CWX9 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx47Q9CWX9 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.34□□□□□ -0.11
Ddx47Q9CWX9 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ddx47Q9CWX9 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC14.34□□□□□ -0.11
Ddx47Q9CWX9 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Ddx47Q9CWX9 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC14.34□□□□□ -0.11
Ddx47Q9CWX9 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ddx47Q9CWX9 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Ddx47Q9CWX9 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Ddx47Q9CWX9 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Ddx47Q9CWX9 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ddx47Q9CWX9 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Ddx47Q9CWX9 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ddx47Q9CWX9 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ddx47Q9CWX9 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ddx47Q9CWX9 Gm7153-201ENSMUST00000117092 455 ntBASIC14.34□□□□□ -0.11
Ddx47Q9CWX9 Gm16198-201ENSMUST00000118766 670 ntBASIC14.34□□□□□ -0.11
Ddx47Q9CWX9 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC14.34□□□□□ -0.11
Ddx47Q9CWX9 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms