Protein–RNA interactions for Protein: Q9CWM4

Pfdn1, Prefoldin subunit 1, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn1Q9CWM4 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pfdn1Q9CWM4 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pfdn1Q9CWM4 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pfdn1Q9CWM4 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pfdn1Q9CWM4 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pfdn1Q9CWM4 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pfdn1Q9CWM4 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pfdn1Q9CWM4 Matn2-203ENSMUST00000226766 3252 ntBASIC12.22□□□□□ -0.45
Pfdn1Q9CWM4 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pfdn1Q9CWM4 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pfdn1Q9CWM4 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pfdn1Q9CWM4 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pfdn1Q9CWM4 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pfdn1Q9CWM4 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pfdn1Q9CWM4 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.22□□□□□ -0.45
Pfdn1Q9CWM4 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pfdn1Q9CWM4 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Pfdn1Q9CWM4 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pfdn1Q9CWM4 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pfdn1Q9CWM4 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pfdn1Q9CWM4 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC12.22□□□□□ -0.45
Pfdn1Q9CWM4 Gm8349-201ENSMUST00000182720 1003 ntBASIC12.22□□□□□ -0.45
Pfdn1Q9CWM4 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC12.22□□□□□ -0.45
Pfdn1Q9CWM4 AC130713.1-201ENSMUST00000228853 1096 ntBASIC12.22□□□□□ -0.45
Pfdn1Q9CWM4 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pfdn1Q9CWM4 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pfdn1Q9CWM4 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pfdn1Q9CWM4 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pfdn1Q9CWM4 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pfdn1Q9CWM4 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pfdn1Q9CWM4 Gm37014-201ENSMUST00000194723 2253 ntBASIC12.22□□□□□ -0.45
Pfdn1Q9CWM4 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pfdn1Q9CWM4 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pfdn1Q9CWM4 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Pfdn1Q9CWM4 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pfdn1Q9CWM4 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Pfdn1Q9CWM4 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pfdn1Q9CWM4 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC12.22□□□□□ -0.45
Pfdn1Q9CWM4 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC12.22□□□□□ -0.45
Pfdn1Q9CWM4 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pfdn1Q9CWM4 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC12.21□□□□□ -0.45
Pfdn1Q9CWM4 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pfdn1Q9CWM4 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pfdn1Q9CWM4 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Pfdn1Q9CWM4 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pfdn1Q9CWM4 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pfdn1Q9CWM4 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Pfdn1Q9CWM4 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pfdn1Q9CWM4 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Pfdn1Q9CWM4 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Pfdn1Q9CWM4 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Pfdn1Q9CWM4 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
Pfdn1Q9CWM4 Gm8344-201ENSMUST00000119813 856 ntBASIC12.21□□□□□ -0.45
Pfdn1Q9CWM4 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pfdn1Q9CWM4 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC12.21□□□□□ -0.45
Pfdn1Q9CWM4 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.21□□□□□ -0.45
Pfdn1Q9CWM4 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC12.21□□□□□ -0.45
Pfdn1Q9CWM4 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pfdn1Q9CWM4 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.21□□□□□ -0.45
Pfdn1Q9CWM4 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pfdn1Q9CWM4 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Pfdn1Q9CWM4 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pfdn1Q9CWM4 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pfdn1Q9CWM4 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Pfdn1Q9CWM4 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pfdn1Q9CWM4 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Pfdn1Q9CWM4 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.21□□□□□ -0.46
Pfdn1Q9CWM4 AC122291.1-201ENSMUST00000228937 5748 ntBASIC12.21□□□□□ -0.46
Pfdn1Q9CWM4 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC12.21□□□□□ -0.46
Pfdn1Q9CWM4 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.21□□□□□ -0.46
Pfdn1Q9CWM4 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pfdn1Q9CWM4 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Pfdn1Q9CWM4 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Pfdn1Q9CWM4 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Pfdn1Q9CWM4 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Pfdn1Q9CWM4 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pfdn1Q9CWM4 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pfdn1Q9CWM4 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Pfdn1Q9CWM4 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pfdn1Q9CWM4 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pfdn1Q9CWM4 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pfdn1Q9CWM4 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pfdn1Q9CWM4 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pfdn1Q9CWM4 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Pfdn1Q9CWM4 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pfdn1Q9CWM4 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.2□□□□□ -0.46
Pfdn1Q9CWM4 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pfdn1Q9CWM4 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC12.2□□□□□ -0.46
Pfdn1Q9CWM4 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pfdn1Q9CWM4 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pfdn1Q9CWM4 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC12.2□□□□□ -0.46
Pfdn1Q9CWM4 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pfdn1Q9CWM4 Gm715-201ENSMUST00000117865 831 ntBASIC12.2□□□□□ -0.46
Pfdn1Q9CWM4 Gm12441-201ENSMUST00000121806 588 ntBASIC12.2□□□□□ -0.46
Pfdn1Q9CWM4 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pfdn1Q9CWM4 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC12.2□□□□□ -0.46
Pfdn1Q9CWM4 Gm21814-202ENSMUST00000203277 873 ntBASIC12.2□□□□□ -0.46
Pfdn1Q9CWM4 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC12.2□□□□□ -0.46
Pfdn1Q9CWM4 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC12.2□□□□□ -0.46
Pfdn1Q9CWM4 AC154649.1-201ENSMUST00000227392 384 ntBASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms