Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rpa3Q9CQ71 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rpa3Q9CQ71 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rpa3Q9CQ71 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rpa3Q9CQ71 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpa3Q9CQ71 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Rpa3Q9CQ71 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.78□□□□□ -0.04
Rpa3Q9CQ71 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpa3Q9CQ71 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpa3Q9CQ71 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Rpa3Q9CQ71 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpa3Q9CQ71 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Rpa3Q9CQ71 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpa3Q9CQ71 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpa3Q9CQ71 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpa3Q9CQ71 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpa3Q9CQ71 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC14.78□□□□□ -0.04
Rpa3Q9CQ71 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpa3Q9CQ71 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpa3Q9CQ71 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpa3Q9CQ71 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpa3Q9CQ71 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC14.78□□□□□ -0.04
Rpa3Q9CQ71 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpa3Q9CQ71 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpa3Q9CQ71 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpa3Q9CQ71 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
Rpa3Q9CQ71 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rpa3Q9CQ71 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC14.78□□□□□ -0.04
Rpa3Q9CQ71 Gm13223-201ENSMUST00000118609 747 ntBASIC14.78□□□□□ -0.04
Rpa3Q9CQ71 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpa3Q9CQ71 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC14.78□□□□□ -0.04
Rpa3Q9CQ71 Gm37714-201ENSMUST00000194742 342 ntBASIC14.78□□□□□ -0.04
Rpa3Q9CQ71 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpa3Q9CQ71 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC14.78□□□□□ -0.04
Rpa3Q9CQ71 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC14.78□□□□□ -0.04
Rpa3Q9CQ71 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Rpa3Q9CQ71 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpa3Q9CQ71 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Rpa3Q9CQ71 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpa3Q9CQ71 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpa3Q9CQ71 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC14.78□□□□□ -0.04
Rpa3Q9CQ71 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpa3Q9CQ71 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpa3Q9CQ71 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpa3Q9CQ71 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Rpa3Q9CQ71 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rpa3Q9CQ71 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rpa3Q9CQ71 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rpa3Q9CQ71 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rpa3Q9CQ71 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rpa3Q9CQ71 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC14.77□□□□□ -0.04
Rpa3Q9CQ71 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Rpa3Q9CQ71 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rpa3Q9CQ71 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rpa3Q9CQ71 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Rpa3Q9CQ71 Gm15460-201ENSMUST00000118147 391 ntBASIC14.77□□□□□ -0.05
Rpa3Q9CQ71 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rpa3Q9CQ71 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Rpa3Q9CQ71 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Rpa3Q9CQ71 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC14.77□□□□□ -0.05
Rpa3Q9CQ71 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC14.77□□□□□ -0.05
Rpa3Q9CQ71 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC14.77□□□□□ -0.05
Rpa3Q9CQ71 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rpa3Q9CQ71 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rpa3Q9CQ71 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Rpa3Q9CQ71 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Rpa3Q9CQ71 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rpa3Q9CQ71 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rpa3Q9CQ71 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Rpa3Q9CQ71 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rpa3Q9CQ71 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Rpa3Q9CQ71 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rpa3Q9CQ71 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rpa3Q9CQ71 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.77□□□□□ -0.05
Rpa3Q9CQ71 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rpa3Q9CQ71 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC14.76□□□□□ -0.05
Rpa3Q9CQ71 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rpa3Q9CQ71 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rpa3Q9CQ71 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rpa3Q9CQ71 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC14.76□□□□□ -0.05
Rpa3Q9CQ71 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC14.76□□□□□ -0.05
Rpa3Q9CQ71 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Rpa3Q9CQ71 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rpa3Q9CQ71 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rpa3Q9CQ71 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rpa3Q9CQ71 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC14.76□□□□□ -0.05
Rpa3Q9CQ71 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rpa3Q9CQ71 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rpa3Q9CQ71 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
Rpa3Q9CQ71 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Rpa3Q9CQ71 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rpa3Q9CQ71 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC14.76□□□□□ -0.05
Rpa3Q9CQ71 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Rpa3Q9CQ71 Gm3436-201ENSMUST00000179930 840 ntBASIC14.76□□□□□ -0.05
Rpa3Q9CQ71 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC14.76□□□□□ -0.05
Rpa3Q9CQ71 AC154806.6-201ENSMUST00000228192 202 ntBASIC14.76□□□□□ -0.05
Rpa3Q9CQ71 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rpa3Q9CQ71 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rpa3Q9CQ71 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rpa3Q9CQ71 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms