Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Trim33Q99PP7 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trim33Q99PP7 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim33Q99PP7 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Trim33Q99PP7 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.9□□□□□ -0.18
Trim33Q99PP7 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.9□□□□□ -0.18
Trim33Q99PP7 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Trim33Q99PP7 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trim33Q99PP7 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim33Q99PP7 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim33Q99PP7 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim33Q99PP7 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim33Q99PP7 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim33Q99PP7 Gm24543-201ENSMUST00000103867 82 ntBASIC13.9□□□□□ -0.18
Trim33Q99PP7 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC13.9□□□□□ -0.18
Trim33Q99PP7 Gm12882-201ENSMUST00000121696 517 ntBASIC13.9□□□□□ -0.18
Trim33Q99PP7 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
Trim33Q99PP7 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim33Q99PP7 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trim33Q99PP7 Mir6956-201ENSMUST00000183598 62 ntBASIC13.9□□□□□ -0.18
Trim33Q99PP7 Gm27622-201ENSMUST00000183779 60 ntBASIC13.9□□□□□ -0.18
Trim33Q99PP7 AA619741-201ENSMUST00000195095 646 ntBASIC13.9□□□□□ -0.18
Trim33Q99PP7 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trim33Q99PP7 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.9□□□□□ -0.18
Trim33Q99PP7 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim33Q99PP7 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Trim33Q99PP7 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Trim33Q99PP7 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
Trim33Q99PP7 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim33Q99PP7 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim33Q99PP7 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.9□□□□□ -0.18
Trim33Q99PP7 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim33Q99PP7 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim33Q99PP7 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim33Q99PP7 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim33Q99PP7 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim33Q99PP7 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim33Q99PP7 Gm10652-201ENSMUST00000199790 2622 ntBASIC13.9□□□□□ -0.18
Trim33Q99PP7 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim33Q99PP7 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Trim33Q99PP7 BC001981-202ENSMUST00000191393 1545 ntBASIC13.9□□□□□ -0.19
Trim33Q99PP7 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Trim33Q99PP7 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim33Q99PP7 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim33Q99PP7 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim33Q99PP7 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim33Q99PP7 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim33Q99PP7 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim33Q99PP7 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim33Q99PP7 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim33Q99PP7 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.89□□□□□ -0.19
Trim33Q99PP7 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Trim33Q99PP7 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trim33Q99PP7 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.89□□□□□ -0.19
Trim33Q99PP7 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Trim33Q99PP7 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim33Q99PP7 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim33Q99PP7 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim33Q99PP7 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim33Q99PP7 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.89□□□□□ -0.19
Trim33Q99PP7 Gm14716-201ENSMUST00000120138 718 ntBASIC13.89□□□□□ -0.19
Trim33Q99PP7 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim33Q99PP7 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim33Q99PP7 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.89□□□□□ -0.19
Trim33Q99PP7 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trim33Q99PP7 Gm27618-201ENSMUST00000183671 60 ntBASIC13.89□□□□□ -0.19
Trim33Q99PP7 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC13.89□□□□□ -0.19
Trim33Q99PP7 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim33Q99PP7 Dupd1-202ENSMUST00000224735 548 ntBASIC13.89□□□□□ -0.19
Trim33Q99PP7 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim33Q99PP7 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim33Q99PP7 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim33Q99PP7 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Trim33Q99PP7 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Trim33Q99PP7 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim33Q99PP7 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim33Q99PP7 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trim33Q99PP7 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trim33Q99PP7 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trim33Q99PP7 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC13.89□□□□□ -0.19
Trim33Q99PP7 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim33Q99PP7 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim33Q99PP7 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim33Q99PP7 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trim33Q99PP7 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim33Q99PP7 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim33Q99PP7 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.88□□□□□ -0.19
Trim33Q99PP7 Gm45751-201ENSMUST00000210185 1573 ntBASIC13.88□□□□□ -0.19
Trim33Q99PP7 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.88□□□□□ -0.19
Trim33Q99PP7 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim33Q99PP7 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Trim33Q99PP7 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trim33Q99PP7 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim33Q99PP7 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
Trim33Q99PP7 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim33Q99PP7 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC13.88□□□□□ -0.19
Trim33Q99PP7 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC13.88□□□□□ -0.19
Trim33Q99PP7 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trim33Q99PP7 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trim33Q99PP7 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms