Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim8Q99PJ2 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Trim8Q99PJ2 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim8Q99PJ2 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Trim8Q99PJ2 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim8Q99PJ2 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim8Q99PJ2 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim8Q99PJ2 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim8Q99PJ2 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim8Q99PJ2 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim8Q99PJ2 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim8Q99PJ2 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim8Q99PJ2 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim8Q99PJ2 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim8Q99PJ2 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Trim8Q99PJ2 Gm44492-201ENSMUST00000197012 141 ntBASIC13.69□□□□□ -0.22
Trim8Q99PJ2 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC13.69□□□□□ -0.22
Trim8Q99PJ2 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Trim8Q99PJ2 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim8Q99PJ2 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim8Q99PJ2 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Trim8Q99PJ2 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.69□□□□□ -0.22
Trim8Q99PJ2 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.69□□□□□ -0.22
Trim8Q99PJ2 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim8Q99PJ2 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim8Q99PJ2 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim8Q99PJ2 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim8Q99PJ2 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim8Q99PJ2 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim8Q99PJ2 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim8Q99PJ2 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim8Q99PJ2 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim8Q99PJ2 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim8Q99PJ2 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim8Q99PJ2 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim8Q99PJ2 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.69□□□□□ -0.22
Trim8Q99PJ2 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC13.68□□□□□ -0.22
Trim8Q99PJ2 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim8Q99PJ2 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim8Q99PJ2 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim8Q99PJ2 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim8Q99PJ2 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim8Q99PJ2 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim8Q99PJ2 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim8Q99PJ2 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC13.68□□□□□ -0.22
Trim8Q99PJ2 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
Trim8Q99PJ2 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim8Q99PJ2 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
Trim8Q99PJ2 Gm9727-201ENSMUST00000161387 555 ntBASIC13.68□□□□□ -0.22
Trim8Q99PJ2 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim8Q99PJ2 Rpph1-201ENSMUST00000175096 319 ntBASIC13.68□□□□□ -0.22
Trim8Q99PJ2 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC13.68□□□□□ -0.22
Trim8Q99PJ2 Gm37935-201ENSMUST00000192012 982 ntBASIC13.68□□□□□ -0.22
Trim8Q99PJ2 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim8Q99PJ2 AC159295.1-201ENSMUST00000225326 940 ntBASIC13.68□□□□□ -0.22
Trim8Q99PJ2 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim8Q99PJ2 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim8Q99PJ2 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC13.68□□□□□ -0.22
Trim8Q99PJ2 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim8Q99PJ2 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim8Q99PJ2 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim8Q99PJ2 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim8Q99PJ2 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.68□□□□□ -0.22
Trim8Q99PJ2 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim8Q99PJ2 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim8Q99PJ2 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim8Q99PJ2 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim8Q99PJ2 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Trim8Q99PJ2 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim8Q99PJ2 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim8Q99PJ2 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.68□□□□□ -0.22
Trim8Q99PJ2 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim8Q99PJ2 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim8Q99PJ2 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim8Q99PJ2 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.67□□□□□ -0.22
Trim8Q99PJ2 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim8Q99PJ2 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim8Q99PJ2 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim8Q99PJ2 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trim8Q99PJ2 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim8Q99PJ2 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim8Q99PJ2 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim8Q99PJ2 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim8Q99PJ2 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim8Q99PJ2 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim8Q99PJ2 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC13.67□□□□□ -0.22
Trim8Q99PJ2 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC13.67□□□□□ -0.22
Trim8Q99PJ2 CT030684.1-201ENSMUST00000227292 914 ntBASIC13.67□□□□□ -0.22
Trim8Q99PJ2 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim8Q99PJ2 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim8Q99PJ2 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Trim8Q99PJ2 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim8Q99PJ2 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trim8Q99PJ2 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim8Q99PJ2 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim8Q99PJ2 Gm9347-201ENSMUST00000211473 1607 ntBASIC13.67□□□□□ -0.22
Trim8Q99PJ2 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trim8Q99PJ2 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim8Q99PJ2 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim8Q99PJ2 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms