Protein–RNA interactions for Protein: Q99NB9

Sf3b1, Splicing factor 3B subunit 1, mousemouse

Known RBP Predictions only

Length 1,304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1Q99NB9 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC14.8□□□□□ -0.04
Sf3b1Q99NB9 Gm12960-201ENSMUST00000120017 1066 ntBASIC14.8□□□□□ -0.04
Sf3b1Q99NB9 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Sf3b1Q99NB9 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC14.8□□□□□ -0.04
Sf3b1Q99NB9 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC14.8□□□□□ -0.04
Sf3b1Q99NB9 AC155252.1-201ENSMUST00000226462 1208 ntBASIC14.8□□□□□ -0.04
Sf3b1Q99NB9 Gm45630-201ENSMUST00000210243 1911 ntBASIC14.8□□□□□ -0.04
Sf3b1Q99NB9 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sf3b1Q99NB9 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Sf3b1Q99NB9 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Sf3b1Q99NB9 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sf3b1Q99NB9 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sf3b1Q99NB9 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sf3b1Q99NB9 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Sf3b1Q99NB9 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sf3b1Q99NB9 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sf3b1Q99NB9 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
Sf3b1Q99NB9 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Sf3b1Q99NB9 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sf3b1Q99NB9 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sf3b1Q99NB9 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sf3b1Q99NB9 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Sf3b1Q99NB9 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
Sf3b1Q99NB9 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sf3b1Q99NB9 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sf3b1Q99NB9 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sf3b1Q99NB9 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.79□□□□□ -0.04
Sf3b1Q99NB9 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sf3b1Q99NB9 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sf3b1Q99NB9 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.79□□□□□ -0.04
Sf3b1Q99NB9 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sf3b1Q99NB9 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sf3b1Q99NB9 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sf3b1Q99NB9 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sf3b1Q99NB9 Gm15678-201ENSMUST00000117573 960 ntBASIC14.79□□□□□ -0.04
Sf3b1Q99NB9 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC14.79□□□□□ -0.04
Sf3b1Q99NB9 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC14.79□□□□□ -0.04
Sf3b1Q99NB9 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sf3b1Q99NB9 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Sf3b1Q99NB9 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC14.79□□□□□ -0.04
Sf3b1Q99NB9 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC14.79□□□□□ -0.04
Sf3b1Q99NB9 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC14.79□□□□□ -0.04
Sf3b1Q99NB9 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sf3b1Q99NB9 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC14.79□□□□□ -0.04
Sf3b1Q99NB9 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sf3b1Q99NB9 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sf3b1Q99NB9 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sf3b1Q99NB9 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sf3b1Q99NB9 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sf3b1Q99NB9 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Sf3b1Q99NB9 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sf3b1Q99NB9 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sf3b1Q99NB9 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sf3b1Q99NB9 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sf3b1Q99NB9 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC14.79□□□□□ -0.04
Sf3b1Q99NB9 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Sf3b1Q99NB9 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sf3b1Q99NB9 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Sf3b1Q99NB9 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sf3b1Q99NB9 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sf3b1Q99NB9 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sf3b1Q99NB9 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sf3b1Q99NB9 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.78□□□□□ -0.04
Sf3b1Q99NB9 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sf3b1Q99NB9 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Sf3b1Q99NB9 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Sf3b1Q99NB9 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sf3b1Q99NB9 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sf3b1Q99NB9 Gm13385-201ENSMUST00000121089 220 ntBASIC14.78□□□□□ -0.04
Sf3b1Q99NB9 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC14.78□□□□□ -0.04
Sf3b1Q99NB9 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC14.78□□□□□ -0.04
Sf3b1Q99NB9 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Sf3b1Q99NB9 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC14.78□□□□□ -0.04
Sf3b1Q99NB9 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sf3b1Q99NB9 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC14.78□□□□□ -0.04
Sf3b1Q99NB9 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sf3b1Q99NB9 AC149294.4-201ENSMUST00000227870 882 ntBASIC14.78□□□□□ -0.04
Sf3b1Q99NB9 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Sf3b1Q99NB9 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Sf3b1Q99NB9 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sf3b1Q99NB9 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sf3b1Q99NB9 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sf3b1Q99NB9 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sf3b1Q99NB9 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sf3b1Q99NB9 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Sf3b1Q99NB9 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sf3b1Q99NB9 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sf3b1Q99NB9 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sf3b1Q99NB9 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sf3b1Q99NB9 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sf3b1Q99NB9 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sf3b1Q99NB9 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC14.78□□□□□ -0.04
Sf3b1Q99NB9 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sf3b1Q99NB9 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Sf3b1Q99NB9 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sf3b1Q99NB9 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sf3b1Q99NB9 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Sf3b1Q99NB9 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sf3b1Q99NB9 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sf3b1Q99NB9 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms