Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Msh4Q99MT2 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC13.64□□□□□ -0.23
Msh4Q99MT2 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Msh4Q99MT2 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Msh4Q99MT2 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
Msh4Q99MT2 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Msh4Q99MT2 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Msh4Q99MT2 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Msh4Q99MT2 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Msh4Q99MT2 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Msh4Q99MT2 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC13.63□□□□□ -0.23
Msh4Q99MT2 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Msh4Q99MT2 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Msh4Q99MT2 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Msh4Q99MT2 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Msh4Q99MT2 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Msh4Q99MT2 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Msh4Q99MT2 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Msh4Q99MT2 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Msh4Q99MT2 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Msh4Q99MT2 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Msh4Q99MT2 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Msh4Q99MT2 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Msh4Q99MT2 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Msh4Q99MT2 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC13.63□□□□□ -0.23
Msh4Q99MT2 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Msh4Q99MT2 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC13.63□□□□□ -0.23
Msh4Q99MT2 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Msh4Q99MT2 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Msh4Q99MT2 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Msh4Q99MT2 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Msh4Q99MT2 Gm6888-201ENSMUST00000221983 706 ntBASIC13.63□□□□□ -0.23
Msh4Q99MT2 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Msh4Q99MT2 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Msh4Q99MT2 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Msh4Q99MT2 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Msh4Q99MT2 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Msh4Q99MT2 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Msh4Q99MT2 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Msh4Q99MT2 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Msh4Q99MT2 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Msh4Q99MT2 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Msh4Q99MT2 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Msh4Q99MT2 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Msh4Q99MT2 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Msh4Q99MT2 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Msh4Q99MT2 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Msh4Q99MT2 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Msh4Q99MT2 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.62□□□□□ -0.23
Msh4Q99MT2 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Msh4Q99MT2 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Msh4Q99MT2 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Msh4Q99MT2 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Msh4Q99MT2 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Msh4Q99MT2 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Msh4Q99MT2 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Msh4Q99MT2 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Msh4Q99MT2 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Msh4Q99MT2 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Msh4Q99MT2 Gm5566-201ENSMUST00000116118 459 ntBASIC13.62□□□□□ -0.23
Msh4Q99MT2 Gm14042-201ENSMUST00000120139 833 ntBASIC13.62□□□□□ -0.23
Msh4Q99MT2 Gm6222-201ENSMUST00000120787 396 ntBASIC13.62□□□□□ -0.23
Msh4Q99MT2 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Msh4Q99MT2 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Msh4Q99MT2 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Msh4Q99MT2 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Msh4Q99MT2 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Msh4Q99MT2 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Msh4Q99MT2 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Msh4Q99MT2 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Msh4Q99MT2 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Msh4Q99MT2 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Msh4Q99MT2 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.62□□□□□ -0.23
Msh4Q99MT2 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Msh4Q99MT2 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Msh4Q99MT2 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Msh4Q99MT2 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Msh4Q99MT2 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Msh4Q99MT2 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Msh4Q99MT2 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Msh4Q99MT2 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Msh4Q99MT2 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Msh4Q99MT2 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Msh4Q99MT2 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC13.61□□□□□ -0.23
Msh4Q99MT2 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Msh4Q99MT2 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Msh4Q99MT2 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Msh4Q99MT2 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Msh4Q99MT2 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Msh4Q99MT2 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Msh4Q99MT2 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Msh4Q99MT2 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Msh4Q99MT2 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Msh4Q99MT2 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Msh4Q99MT2 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Msh4Q99MT2 Gm13453-201ENSMUST00000118708 357 ntBASIC13.61□□□□□ -0.23
Msh4Q99MT2 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC13.61□□□□□ -0.23
Msh4Q99MT2 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC13.61□□□□□ -0.23
Msh4Q99MT2 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC13.61□□□□□ -0.23
Msh4Q99MT2 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms