Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Gm2451-201ENSMUST00000199447 999 ntBASIC12.26□□□□□ -0.45
Scrt1Q99M85 Gm10290-201ENSMUST00000200451 999 ntBASIC12.26□□□□□ -0.45
Scrt1Q99M85 Gm6916-202ENSMUST00000205523 195 ntBASIC12.26□□□□□ -0.45
Scrt1Q99M85 Gm45841-201ENSMUST00000207700 164 ntBASIC12.26□□□□□ -0.45
Scrt1Q99M85 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scrt1Q99M85 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Scrt1Q99M85 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Scrt1Q99M85 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Scrt1Q99M85 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scrt1Q99M85 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scrt1Q99M85 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Scrt1Q99M85 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Scrt1Q99M85 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Scrt1Q99M85 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Scrt1Q99M85 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scrt1Q99M85 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Scrt1Q99M85 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scrt1Q99M85 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC12.25□□□□□ -0.45
Scrt1Q99M85 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scrt1Q99M85 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Scrt1Q99M85 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Scrt1Q99M85 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scrt1Q99M85 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
Scrt1Q99M85 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Scrt1Q99M85 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scrt1Q99M85 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scrt1Q99M85 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scrt1Q99M85 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scrt1Q99M85 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Scrt1Q99M85 Gm12390-201ENSMUST00000117897 397 ntBASIC12.25□□□□□ -0.45
Scrt1Q99M85 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.25□□□□□ -0.45
Scrt1Q99M85 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
Scrt1Q99M85 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Scrt1Q99M85 Gm27839-201ENSMUST00000184242 106 ntBASIC12.25□□□□□ -0.45
Scrt1Q99M85 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Scrt1Q99M85 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.25□□□□□ -0.45
Scrt1Q99M85 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scrt1Q99M85 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scrt1Q99M85 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scrt1Q99M85 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Scrt1Q99M85 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scrt1Q99M85 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scrt1Q99M85 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scrt1Q99M85 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scrt1Q99M85 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Scrt1Q99M85 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Scrt1Q99M85 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scrt1Q99M85 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Scrt1Q99M85 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scrt1Q99M85 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scrt1Q99M85 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Scrt1Q99M85 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scrt1Q99M85 Gm42471-201ENSMUST00000201457 1865 ntBASIC12.25□□□□□ -0.45
Scrt1Q99M85 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scrt1Q99M85 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scrt1Q99M85 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scrt1Q99M85 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scrt1Q99M85 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scrt1Q99M85 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scrt1Q99M85 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scrt1Q99M85 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scrt1Q99M85 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scrt1Q99M85 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Scrt1Q99M85 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scrt1Q99M85 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Scrt1Q99M85 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Scrt1Q99M85 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scrt1Q99M85 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scrt1Q99M85 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scrt1Q99M85 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scrt1Q99M85 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.24□□□□□ -0.45
Scrt1Q99M85 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Scrt1Q99M85 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC12.24□□□□□ -0.45
Scrt1Q99M85 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Scrt1Q99M85 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Scrt1Q99M85 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC12.24□□□□□ -0.45
Scrt1Q99M85 Gm44799-201ENSMUST00000207639 1202 ntBASIC12.24□□□□□ -0.45
Scrt1Q99M85 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12.24□□□□□ -0.45
Scrt1Q99M85 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scrt1Q99M85 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC12.24□□□□□ -0.45
Scrt1Q99M85 AC139580.1-202ENSMUST00000223574 928 ntBASIC12.24□□□□□ -0.45
Scrt1Q99M85 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC12.24□□□□□ -0.45
Scrt1Q99M85 AC156016.3-201ENSMUST00000228623 344 ntBASIC12.24□□□□□ -0.45
Scrt1Q99M85 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC12.24□□□□□ -0.45
Scrt1Q99M85 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scrt1Q99M85 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scrt1Q99M85 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scrt1Q99M85 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Scrt1Q99M85 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scrt1Q99M85 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC12.24□□□□□ -0.45
Scrt1Q99M85 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scrt1Q99M85 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Scrt1Q99M85 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Scrt1Q99M85 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scrt1Q99M85 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scrt1Q99M85 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scrt1Q99M85 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scrt1Q99M85 Gm28182-201ENSMUST00000188354 2477 ntBASIC12.23□□□□□ -0.45
Scrt1Q99M85 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scrt1Q99M85 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms