Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcd2Q99JR8 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
Smarcd2Q99JR8 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcd2Q99JR8 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcd2Q99JR8 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcd2Q99JR8 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Smarcd2Q99JR8 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.05□□□□□ -0.16
Smarcd2Q99JR8 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcd2Q99JR8 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcd2Q99JR8 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcd2Q99JR8 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Smarcd2Q99JR8 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcd2Q99JR8 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcd2Q99JR8 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcd2Q99JR8 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC14.05□□□□□ -0.16
Smarcd2Q99JR8 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcd2Q99JR8 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcd2Q99JR8 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Smarcd2Q99JR8 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Smarcd2Q99JR8 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Smarcd2Q99JR8 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC14.05□□□□□ -0.16
Smarcd2Q99JR8 Gm43818-201ENSMUST00000200605 466 ntBASIC14.05□□□□□ -0.16
Smarcd2Q99JR8 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcd2Q99JR8 Gm40466-201ENSMUST00000212174 422 ntBASIC14.05□□□□□ -0.16
Smarcd2Q99JR8 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcd2Q99JR8 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcd2Q99JR8 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcd2Q99JR8 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Smarcd2Q99JR8 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcd2Q99JR8 Gm8399-201ENSMUST00000082300 1117 ntBASIC14.05□□□□□ -0.16
Smarcd2Q99JR8 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcd2Q99JR8 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcd2Q99JR8 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcd2Q99JR8 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Smarcd2Q99JR8 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcd2Q99JR8 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Smarcd2Q99JR8 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcd2Q99JR8 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcd2Q99JR8 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC14.05□□□□□ -0.16
Smarcd2Q99JR8 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcd2Q99JR8 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Smarcd2Q99JR8 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcd2Q99JR8 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Smarcd2Q99JR8 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Smarcd2Q99JR8 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcd2Q99JR8 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcd2Q99JR8 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcd2Q99JR8 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcd2Q99JR8 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcd2Q99JR8 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcd2Q99JR8 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Smarcd2Q99JR8 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcd2Q99JR8 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcd2Q99JR8 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
Smarcd2Q99JR8 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC14.04□□□□□ -0.16
Smarcd2Q99JR8 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcd2Q99JR8 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC14.04□□□□□ -0.16
Smarcd2Q99JR8 Gm6152-201ENSMUST00000151704 340 ntBASIC14.04□□□□□ -0.16
Smarcd2Q99JR8 Gm22331-201ENSMUST00000158066 136 ntBASIC14.04□□□□□ -0.16
Smarcd2Q99JR8 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC14.04□□□□□ -0.16
Smarcd2Q99JR8 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC14.04□□□□□ -0.16
Smarcd2Q99JR8 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC14.04□□□□□ -0.16
Smarcd2Q99JR8 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC14.04□□□□□ -0.16
Smarcd2Q99JR8 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC14.04□□□□□ -0.16
Smarcd2Q99JR8 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcd2Q99JR8 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcd2Q99JR8 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.04□□□□□ -0.16
Smarcd2Q99JR8 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcd2Q99JR8 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcd2Q99JR8 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcd2Q99JR8 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcd2Q99JR8 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcd2Q99JR8 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Smarcd2Q99JR8 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcd2Q99JR8 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcd2Q99JR8 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcd2Q99JR8 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcd2Q99JR8 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcd2Q99JR8 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcd2Q99JR8 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcd2Q99JR8 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcd2Q99JR8 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcd2Q99JR8 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.03□□□□□ -0.16
Smarcd2Q99JR8 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcd2Q99JR8 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Smarcd2Q99JR8 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcd2Q99JR8 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcd2Q99JR8 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC14.03□□□□□ -0.16
Smarcd2Q99JR8 Gm11803-201ENSMUST00000119966 444 ntBASIC14.03□□□□□ -0.16
Smarcd2Q99JR8 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Smarcd2Q99JR8 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcd2Q99JR8 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC14.03□□□□□ -0.16
Smarcd2Q99JR8 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC14.03□□□□□ -0.16
Smarcd2Q99JR8 Gm8565-201ENSMUST00000183259 1014 ntBASIC14.03□□□□□ -0.16
Smarcd2Q99JR8 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC14.03□□□□□ -0.16
Smarcd2Q99JR8 Gm44974-201ENSMUST00000206387 1279 ntBASIC14.03□□□□□ -0.16
Smarcd2Q99JR8 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcd2Q99JR8 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcd2Q99JR8 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Smarcd2Q99JR8 Gm7553-201ENSMUST00000185805 1426 ntBASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms