Protein–RNA interactions for Protein: Q921M3

Sf3b3, Splicing factor 3B subunit 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b3Q921M3 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sf3b3Q921M3 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sf3b3Q921M3 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sf3b3Q921M3 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Sf3b3Q921M3 Rn7sk-201ENSMUST00000083103 331 ntBASIC16.69■□□□□ 0.26
Sf3b3Q921M3 Gm26315-201ENSMUST00000083890 321 ntBASIC16.69■□□□□ 0.26
Sf3b3Q921M3 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Sf3b3Q921M3 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Sf3b3Q921M3 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Sf3b3Q921M3 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Sf3b3Q921M3 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Sf3b3Q921M3 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sf3b3Q921M3 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sf3b3Q921M3 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sf3b3Q921M3 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC16.69■□□□□ 0.26
Sf3b3Q921M3 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sf3b3Q921M3 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sf3b3Q921M3 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sf3b3Q921M3 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sf3b3Q921M3 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sf3b3Q921M3 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sf3b3Q921M3 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sf3b3Q921M3 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Sf3b3Q921M3 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Sf3b3Q921M3 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sf3b3Q921M3 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sf3b3Q921M3 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Sf3b3Q921M3 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sf3b3Q921M3 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sf3b3Q921M3 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
Sf3b3Q921M3 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC16.68■□□□□ 0.26
Sf3b3Q921M3 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Sf3b3Q921M3 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sf3b3Q921M3 Mir1247-201ENSMUST00000116706 82 ntBASIC16.68■□□□□ 0.26
Sf3b3Q921M3 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
Sf3b3Q921M3 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC16.68■□□□□ 0.26
Sf3b3Q921M3 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Sf3b3Q921M3 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Sf3b3Q921M3 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC16.68■□□□□ 0.26
Sf3b3Q921M3 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC16.68■□□□□ 0.26
Sf3b3Q921M3 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sf3b3Q921M3 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sf3b3Q921M3 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Sf3b3Q921M3 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC16.68■□□□□ 0.26
Sf3b3Q921M3 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sf3b3Q921M3 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Sf3b3Q921M3 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC16.68■□□□□ 0.26
Sf3b3Q921M3 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Sf3b3Q921M3 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Sf3b3Q921M3 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
Sf3b3Q921M3 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC16.67■□□□□ 0.26
Sf3b3Q921M3 Gm42853-201ENSMUST00000201273 1387 ntBASIC16.67■□□□□ 0.26
Sf3b3Q921M3 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sf3b3Q921M3 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC16.67■□□□□ 0.26
Sf3b3Q921M3 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Sf3b3Q921M3 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sf3b3Q921M3 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sf3b3Q921M3 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Sf3b3Q921M3 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sf3b3Q921M3 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Sf3b3Q921M3 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC16.67■□□□□ 0.26
Sf3b3Q921M3 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Sf3b3Q921M3 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC16.67■□□□□ 0.26
Sf3b3Q921M3 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Sf3b3Q921M3 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC16.67■□□□□ 0.26
Sf3b3Q921M3 Gm2639-201ENSMUST00000156881 1297 ntBASIC16.67■□□□□ 0.26
Sf3b3Q921M3 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sf3b3Q921M3 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Sf3b3Q921M3 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC16.67■□□□□ 0.26
Sf3b3Q921M3 Gm44974-201ENSMUST00000206387 1279 ntBASIC16.67■□□□□ 0.26
Sf3b3Q921M3 Gm18054-201ENSMUST00000207539 555 ntBASIC16.67■□□□□ 0.26
Sf3b3Q921M3 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC16.67■□□□□ 0.26
Sf3b3Q921M3 AC159896.2-201ENSMUST00000214753 269 ntBASIC16.67■□□□□ 0.26
Sf3b3Q921M3 AC154319.1-201ENSMUST00000216330 312 ntBASIC16.67■□□□□ 0.26
Sf3b3Q921M3 AL589735.1-201ENSMUST00000224353 270 ntBASIC16.67■□□□□ 0.26
Sf3b3Q921M3 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sf3b3Q921M3 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Sf3b3Q921M3 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sf3b3Q921M3 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sf3b3Q921M3 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC16.67■□□□□ 0.26
Sf3b3Q921M3 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sf3b3Q921M3 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC16.67■□□□□ 0.26
Sf3b3Q921M3 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC16.67■□□□□ 0.26
Sf3b3Q921M3 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sf3b3Q921M3 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sf3b3Q921M3 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sf3b3Q921M3 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC16.66■□□□□ 0.26
Sf3b3Q921M3 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sf3b3Q921M3 Gm20632-201ENSMUST00000176760 2427 ntBASIC16.66■□□□□ 0.26
Sf3b3Q921M3 Gm10605-202ENSMUST00000183019 3198 ntBASIC16.66■□□□□ 0.26
Sf3b3Q921M3 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sf3b3Q921M3 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sf3b3Q921M3 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Sf3b3Q921M3 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Sf3b3Q921M3 Gm12203-201ENSMUST00000118235 598 ntBASIC16.66■□□□□ 0.26
Sf3b3Q921M3 Gm12209-201ENSMUST00000120089 596 ntBASIC16.66■□□□□ 0.26
Sf3b3Q921M3 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC16.66■□□□□ 0.26
Sf3b3Q921M3 Gm11400-201ENSMUST00000120853 1214 ntBASIC16.66■□□□□ 0.26
Sf3b3Q921M3 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC16.66■□□□□ 0.26
Sf3b3Q921M3 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms