Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smc1bQ920F6 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smc1bQ920F6 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Smc1bQ920F6 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC16.13■□□□□ 0.17
Smc1bQ920F6 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smc1bQ920F6 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smc1bQ920F6 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smc1bQ920F6 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Smc1bQ920F6 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC16.13■□□□□ 0.17
Smc1bQ920F6 Gm27892-201ENSMUST00000185017 106 ntBASIC16.13■□□□□ 0.17
Smc1bQ920F6 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC16.13■□□□□ 0.17
Smc1bQ920F6 Gm45098-201ENSMUST00000207179 657 ntBASIC16.13■□□□□ 0.17
Smc1bQ920F6 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC16.13■□□□□ 0.17
Smc1bQ920F6 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smc1bQ920F6 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smc1bQ920F6 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smc1bQ920F6 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smc1bQ920F6 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Smc1bQ920F6 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC16.13■□□□□ 0.17
Smc1bQ920F6 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Smc1bQ920F6 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smc1bQ920F6 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smc1bQ920F6 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Smc1bQ920F6 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smc1bQ920F6 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Smc1bQ920F6 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smc1bQ920F6 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Smc1bQ920F6 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC16.13■□□□□ 0.17
Smc1bQ920F6 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smc1bQ920F6 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Smc1bQ920F6 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smc1bQ920F6 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smc1bQ920F6 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smc1bQ920F6 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smc1bQ920F6 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smc1bQ920F6 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smc1bQ920F6 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Smc1bQ920F6 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC16.12■□□□□ 0.17
Smc1bQ920F6 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smc1bQ920F6 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC16.12■□□□□ 0.17
Smc1bQ920F6 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC16.12■□□□□ 0.17
Smc1bQ920F6 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smc1bQ920F6 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC16.12■□□□□ 0.17
Smc1bQ920F6 Mir1982-201ENSMUST00000157368 74 ntBASIC16.12■□□□□ 0.17
Smc1bQ920F6 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smc1bQ920F6 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC16.12■□□□□ 0.17
Smc1bQ920F6 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smc1bQ920F6 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smc1bQ920F6 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Smc1bQ920F6 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smc1bQ920F6 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smc1bQ920F6 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smc1bQ920F6 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smc1bQ920F6 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
Smc1bQ920F6 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Smc1bQ920F6 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Smc1bQ920F6 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smc1bQ920F6 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Smc1bQ920F6 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Smc1bQ920F6 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Smc1bQ920F6 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smc1bQ920F6 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Smc1bQ920F6 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smc1bQ920F6 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smc1bQ920F6 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smc1bQ920F6 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smc1bQ920F6 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC16.11■□□□□ 0.17
Smc1bQ920F6 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smc1bQ920F6 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smc1bQ920F6 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smc1bQ920F6 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Smc1bQ920F6 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smc1bQ920F6 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
Smc1bQ920F6 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC16.11■□□□□ 0.17
Smc1bQ920F6 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Smc1bQ920F6 Gm6944-201ENSMUST00000182449 1006 ntBASIC16.11■□□□□ 0.17
Smc1bQ920F6 Gm27701-201ENSMUST00000184498 110 ntBASIC16.11■□□□□ 0.17
Smc1bQ920F6 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC16.11■□□□□ 0.17
Smc1bQ920F6 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC16.11■□□□□ 0.17
Smc1bQ920F6 AC238811.3-201ENSMUST00000225422 709 ntBASIC16.11■□□□□ 0.17
Smc1bQ920F6 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Smc1bQ920F6 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smc1bQ920F6 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smc1bQ920F6 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smc1bQ920F6 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smc1bQ920F6 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smc1bQ920F6 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smc1bQ920F6 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Smc1bQ920F6 Gm42632-201ENSMUST00000201707 2411 ntBASIC16.1■□□□□ 0.17
Smc1bQ920F6 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Smc1bQ920F6 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smc1bQ920F6 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smc1bQ920F6 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
Smc1bQ920F6 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC16.1■□□□□ 0.17
Smc1bQ920F6 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smc1bQ920F6 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC16.1■□□□□ 0.17
Smc1bQ920F6 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smc1bQ920F6 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Smc1bQ920F6 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Smc1bQ920F6 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms