Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Pcdhb1Q91Y08 Gm27618-201ENSMUST00000183671 60 ntBASIC14.53□□□□□ -0.08
Pcdhb1Q91Y08 Gm10576-201ENSMUST00000191927 825 ntBASIC14.53□□□□□ -0.08
Pcdhb1Q91Y08 Gm37277-201ENSMUST00000194052 1111 ntBASIC14.53□□□□□ -0.08
Pcdhb1Q91Y08 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC14.53□□□□□ -0.08
Pcdhb1Q91Y08 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb1Q91Y08 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb1Q91Y08 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb1Q91Y08 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb1Q91Y08 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb1Q91Y08 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb1Q91Y08 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb1Q91Y08 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb1Q91Y08 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb1Q91Y08 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdhb1Q91Y08 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.52□□□□□ -0.08
Pcdhb1Q91Y08 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdhb1Q91Y08 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdhb1Q91Y08 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdhb1Q91Y08 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC14.52□□□□□ -0.08
Pcdhb1Q91Y08 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
Pcdhb1Q91Y08 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdhb1Q91Y08 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Pcdhb1Q91Y08 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdhb1Q91Y08 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdhb1Q91Y08 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdhb1Q91Y08 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhb1Q91Y08 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC14.52□□□□□ -0.09
Pcdhb1Q91Y08 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC14.52□□□□□ -0.09
Pcdhb1Q91Y08 AC153872.1-201ENSMUST00000199539 128 ntBASIC14.52□□□□□ -0.09
Pcdhb1Q91Y08 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhb1Q91Y08 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhb1Q91Y08 Gm12626-201ENSMUST00000117339 1983 ntBASIC14.52□□□□□ -0.09
Pcdhb1Q91Y08 Gm12623-201ENSMUST00000119849 1983 ntBASIC14.52□□□□□ -0.09
Pcdhb1Q91Y08 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.52□□□□□ -0.09
Pcdhb1Q91Y08 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC14.52□□□□□ -0.09
Pcdhb1Q91Y08 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhb1Q91Y08 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhb1Q91Y08 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Pcdhb1Q91Y08 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.52□□□□□ -0.09
Pcdhb1Q91Y08 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhb1Q91Y08 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Pcdhb1Q91Y08 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Pcdhb1Q91Y08 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb1Q91Y08 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb1Q91Y08 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Pcdhb1Q91Y08 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
Pcdhb1Q91Y08 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.51□□□□□ -0.09
Pcdhb1Q91Y08 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb1Q91Y08 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb1Q91Y08 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC14.51□□□□□ -0.09
Pcdhb1Q91Y08 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC14.51□□□□□ -0.09
Pcdhb1Q91Y08 Gm13616-201ENSMUST00000120600 222 ntBASIC14.51□□□□□ -0.09
Pcdhb1Q91Y08 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
Pcdhb1Q91Y08 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb1Q91Y08 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC14.51□□□□□ -0.09
Pcdhb1Q91Y08 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb1Q91Y08 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Pcdhb1Q91Y08 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb1Q91Y08 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb1Q91Y08 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb1Q91Y08 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb1Q91Y08 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb1Q91Y08 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb1Q91Y08 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Pcdhb1Q91Y08 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb1Q91Y08 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
Pcdhb1Q91Y08 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb1Q91Y08 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb1Q91Y08 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
Pcdhb1Q91Y08 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb1Q91Y08 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Pcdhb1Q91Y08 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.5□□□□□ -0.09
Pcdhb1Q91Y08 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb1Q91Y08 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Pcdhb1Q91Y08 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb1Q91Y08 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb1Q91Y08 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb1Q91Y08 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb1Q91Y08 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Pcdhb1Q91Y08 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb1Q91Y08 Gm7820-201ENSMUST00000121012 1052 ntBASIC14.5□□□□□ -0.09
Pcdhb1Q91Y08 Gm14767-201ENSMUST00000121559 586 ntBASIC14.5□□□□□ -0.09
Pcdhb1Q91Y08 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb1Q91Y08 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb1Q91Y08 Gm27680-201ENSMUST00000184192 160 ntBASIC14.5□□□□□ -0.09
Pcdhb1Q91Y08 Gm7063-201ENSMUST00000186840 981 ntBASIC14.5□□□□□ -0.09
Pcdhb1Q91Y08 Gm21470-201ENSMUST00000187680 696 ntBASIC14.5□□□□□ -0.09
Pcdhb1Q91Y08 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb1Q91Y08 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb1Q91Y08 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb1Q91Y08 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Pcdhb1Q91Y08 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb1Q91Y08 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb1Q91Y08 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Pcdhb1Q91Y08 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb1Q91Y08 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb1Q91Y08 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.5□□□□□ -0.09
Pcdhb1Q91Y08 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.5□□□□□ -0.09
Pcdhb1Q91Y08 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms