Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Pcdhb20Q91XZ9 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb20Q91XZ9 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Pcdhb20Q91XZ9 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb20Q91XZ9 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb20Q91XZ9 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Pcdhb20Q91XZ9 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb20Q91XZ9 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Pcdhb20Q91XZ9 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb20Q91XZ9 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Pcdhb20Q91XZ9 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Pcdhb20Q91XZ9 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Pcdhb20Q91XZ9 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb20Q91XZ9 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb20Q91XZ9 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb20Q91XZ9 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb20Q91XZ9 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb20Q91XZ9 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb20Q91XZ9 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Pcdhb20Q91XZ9 Gm37160-201ENSMUST00000193081 1689 ntBASIC13.8□□□□□ -0.2
Pcdhb20Q91XZ9 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb20Q91XZ9 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb20Q91XZ9 Gm15653-201ENSMUST00000119247 907 ntBASIC13.8□□□□□ -0.2
Pcdhb20Q91XZ9 Gm12591-201ENSMUST00000122407 1177 ntBASIC13.8□□□□□ -0.2
Pcdhb20Q91XZ9 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC13.8□□□□□ -0.2
Pcdhb20Q91XZ9 Gm3047-202ENSMUST00000177998 618 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Pcdhb20Q91XZ9 Gm8297-203ENSMUST00000178389 618 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Pcdhb20Q91XZ9 Gm3460-202ENSMUST00000178927 618 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Pcdhb20Q91XZ9 Gm21103-203ENSMUST00000179042 618 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Pcdhb20Q91XZ9 Gm8159-203ENSMUST00000179231 618 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Pcdhb20Q91XZ9 Gm3029-202ENSMUST00000179327 618 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Pcdhb20Q91XZ9 Gm26609-201ENSMUST00000181302 852 ntTSL 5 BASIC13.8□□□□□ -0.2
Pcdhb20Q91XZ9 4931440J10Rik-201ENSMUST00000181344 891 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb20Q91XZ9 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC13.8□□□□□ -0.2
Pcdhb20Q91XZ9 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC13.8□□□□□ -0.2
Pcdhb20Q91XZ9 Gm28195-201ENSMUST00000186992 372 ntBASIC13.8□□□□□ -0.2
Pcdhb20Q91XZ9 Gm38294-201ENSMUST00000192831 381 ntBASIC13.8□□□□□ -0.2
Pcdhb20Q91XZ9 AA619741-201ENSMUST00000195095 646 ntBASIC13.8□□□□□ -0.2
Pcdhb20Q91XZ9 Gm43894-201ENSMUST00000203274 688 ntBASIC13.8□□□□□ -0.2
Pcdhb20Q91XZ9 AC154643.1-201ENSMUST00000225643 625 ntBASIC13.8□□□□□ -0.2
Pcdhb20Q91XZ9 AC133517.2-201ENSMUST00000226820 690 ntBASIC13.8□□□□□ -0.2
Pcdhb20Q91XZ9 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb20Q91XZ9 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb20Q91XZ9 Olfr834-201ENSMUST00000086492 939 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Pcdhb20Q91XZ9 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb20Q91XZ9 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb20Q91XZ9 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb20Q91XZ9 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb20Q91XZ9 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb20Q91XZ9 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Pcdhb20Q91XZ9 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb20Q91XZ9 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb20Q91XZ9 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb20Q91XZ9 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb20Q91XZ9 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb20Q91XZ9 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb20Q91XZ9 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Pcdhb20Q91XZ9 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb20Q91XZ9 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb20Q91XZ9 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb20Q91XZ9 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb20Q91XZ9 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb20Q91XZ9 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb20Q91XZ9 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb20Q91XZ9 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb20Q91XZ9 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb20Q91XZ9 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Pcdhb20Q91XZ9 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Pcdhb20Q91XZ9 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Pcdhb20Q91XZ9 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Pcdhb20Q91XZ9 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb20Q91XZ9 Gm14417-201ENSMUST00000120036 1074 ntBASIC13.79□□□□□ -0.2
Pcdhb20Q91XZ9 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC13.79□□□□□ -0.2
Pcdhb20Q91XZ9 1700057H21Rik-201ENSMUST00000152467 383 ntTSL 5 BASIC13.79□□□□□ -0.2
Pcdhb20Q91XZ9 Gm6182-201ENSMUST00000156439 1208 ntBASIC13.79□□□□□ -0.2
Pcdhb20Q91XZ9 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb20Q91XZ9 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC13.79□□□□□ -0.2
Pcdhb20Q91XZ9 Scnm1-201ENSMUST00000172572 1054 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb20Q91XZ9 Gm24111-201ENSMUST00000175491 97 ntBASIC13.79□□□□□ -0.2
Pcdhb20Q91XZ9 Pou1f1-205ENSMUST00000184525 1020 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb20Q91XZ9 Gm38283-201ENSMUST00000193041 695 ntBASIC13.79□□□□□ -0.2
Pcdhb20Q91XZ9 Gm44344-201ENSMUST00000200287 129 ntBASIC13.79□□□□□ -0.2
Pcdhb20Q91XZ9 4833403J16Rik-201ENSMUST00000204490 1031 ntBASIC13.79□□□□□ -0.2
Pcdhb20Q91XZ9 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC13.79□□□□□ -0.2
Pcdhb20Q91XZ9 Gm16476-201ENSMUST00000221544 139 ntBASIC13.79□□□□□ -0.2
Pcdhb20Q91XZ9 Shd-206ENSMUST00000225145 998 ntBASIC13.79□□□□□ -0.2
Pcdhb20Q91XZ9 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.79□□□□□ -0.2
Pcdhb20Q91XZ9 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb20Q91XZ9 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb20Q91XZ9 Prl8a9-201ENSMUST00000006662 942 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb20Q91XZ9 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb20Q91XZ9 Vpreb3-201ENSMUST00000000926 625 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb20Q91XZ9 Olfr1180-201ENSMUST00000099824 1063 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Pcdhb20Q91XZ9 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb20Q91XZ9 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb20Q91XZ9 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb20Q91XZ9 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb20Q91XZ9 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb20Q91XZ9 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb20Q91XZ9 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms