Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trex1Q91XB0 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trex1Q91XB0 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trex1Q91XB0 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Trex1Q91XB0 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Trex1Q91XB0 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trex1Q91XB0 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Trex1Q91XB0 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC15.93■□□□□ 0.14
Trex1Q91XB0 Gm13612-201ENSMUST00000119276 390 ntBASIC15.93■□□□□ 0.14
Trex1Q91XB0 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC15.93■□□□□ 0.14
Trex1Q91XB0 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trex1Q91XB0 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC15.93■□□□□ 0.14
Trex1Q91XB0 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC15.93■□□□□ 0.14
Trex1Q91XB0 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trex1Q91XB0 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trex1Q91XB0 Gm5161-201ENSMUST00000075243 853 ntBASIC15.93■□□□□ 0.14
Trex1Q91XB0 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Trex1Q91XB0 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trex1Q91XB0 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trex1Q91XB0 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trex1Q91XB0 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trex1Q91XB0 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trex1Q91XB0 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Trex1Q91XB0 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trex1Q91XB0 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trex1Q91XB0 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trex1Q91XB0 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trex1Q91XB0 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trex1Q91XB0 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
Trex1Q91XB0 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trex1Q91XB0 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trex1Q91XB0 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trex1Q91XB0 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trex1Q91XB0 Gm9867-201ENSMUST00000192212 2647 ntBASIC15.92■□□□□ 0.14
Trex1Q91XB0 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trex1Q91XB0 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trex1Q91XB0 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trex1Q91XB0 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trex1Q91XB0 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trex1Q91XB0 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trex1Q91XB0 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trex1Q91XB0 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trex1Q91XB0 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC15.92■□□□□ 0.14
Trex1Q91XB0 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC15.92■□□□□ 0.14
Trex1Q91XB0 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trex1Q91XB0 Gm45784-201ENSMUST00000188360 142 ntBASIC15.92■□□□□ 0.14
Trex1Q91XB0 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trex1Q91XB0 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC15.92■□□□□ 0.14
Trex1Q91XB0 Gm24447-201ENSMUST00000083977 338 ntBASIC15.92■□□□□ 0.14
Trex1Q91XB0 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Trex1Q91XB0 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trex1Q91XB0 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC15.92■□□□□ 0.14
Trex1Q91XB0 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Trex1Q91XB0 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC15.92■□□□□ 0.14
Trex1Q91XB0 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trex1Q91XB0 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC15.92■□□□□ 0.14
Trex1Q91XB0 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trex1Q91XB0 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC15.92■□□□□ 0.14
Trex1Q91XB0 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trex1Q91XB0 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trex1Q91XB0 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trex1Q91XB0 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trex1Q91XB0 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trex1Q91XB0 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trex1Q91XB0 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trex1Q91XB0 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trex1Q91XB0 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trex1Q91XB0 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Trex1Q91XB0 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trex1Q91XB0 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Trex1Q91XB0 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trex1Q91XB0 Gm14660-201ENSMUST00000119809 575 ntBASIC15.91■□□□□ 0.14
Trex1Q91XB0 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC15.91■□□□□ 0.14
Trex1Q91XB0 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trex1Q91XB0 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC15.91■□□□□ 0.14
Trex1Q91XB0 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC15.91■□□□□ 0.14
Trex1Q91XB0 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC15.91■□□□□ 0.14
Trex1Q91XB0 AC140451.2-201ENSMUST00000228030 664 ntBASIC15.91■□□□□ 0.14
Trex1Q91XB0 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Trex1Q91XB0 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trex1Q91XB0 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trex1Q91XB0 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trex1Q91XB0 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Trex1Q91XB0 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trex1Q91XB0 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trex1Q91XB0 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trex1Q91XB0 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trex1Q91XB0 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trex1Q91XB0 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trex1Q91XB0 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trex1Q91XB0 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trex1Q91XB0 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trex1Q91XB0 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trex1Q91XB0 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trex1Q91XB0 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trex1Q91XB0 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC15.91■□□□□ 0.14
Trex1Q91XB0 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trex1Q91XB0 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trex1Q91XB0 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC15.9■□□□□ 0.14
Trex1Q91XB0 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms