Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
StrcQ8VIM6 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
StrcQ8VIM6 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
StrcQ8VIM6 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
StrcQ8VIM6 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC16.22■□□□□ 0.19
StrcQ8VIM6 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC16.22■□□□□ 0.19
StrcQ8VIM6 Gm44262-201ENSMUST00000204969 372 ntBASIC16.22■□□□□ 0.19
StrcQ8VIM6 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
StrcQ8VIM6 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
StrcQ8VIM6 Gm18212-201ENSMUST00000211678 889 ntBASIC16.22■□□□□ 0.19
StrcQ8VIM6 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
StrcQ8VIM6 Gm4366-201ENSMUST00000201488 1342 ntBASIC16.22■□□□□ 0.19
StrcQ8VIM6 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
StrcQ8VIM6 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
StrcQ8VIM6 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
StrcQ8VIM6 Gm9856-201ENSMUST00000217077 2578 ntBASIC16.21■□□□□ 0.19
StrcQ8VIM6 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
StrcQ8VIM6 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
StrcQ8VIM6 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
StrcQ8VIM6 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
StrcQ8VIM6 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
StrcQ8VIM6 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
StrcQ8VIM6 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
StrcQ8VIM6 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
StrcQ8VIM6 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
StrcQ8VIM6 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC16.21■□□□□ 0.19
StrcQ8VIM6 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC16.21■□□□□ 0.19
StrcQ8VIM6 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
StrcQ8VIM6 Gm9083-201ENSMUST00000120423 819 ntBASIC16.21■□□□□ 0.19
StrcQ8VIM6 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC16.21■□□□□ 0.19
StrcQ8VIM6 Gm25700-201ENSMUST00000177693 110 ntBASIC16.21■□□□□ 0.19
StrcQ8VIM6 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
StrcQ8VIM6 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
StrcQ8VIM6 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
StrcQ8VIM6 Gm8385-201ENSMUST00000058999 643 ntBASIC16.21■□□□□ 0.19
StrcQ8VIM6 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
StrcQ8VIM6 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
StrcQ8VIM6 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
StrcQ8VIM6 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
StrcQ8VIM6 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
StrcQ8VIM6 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
StrcQ8VIM6 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
StrcQ8VIM6 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC16.2■□□□□ 0.18
StrcQ8VIM6 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
StrcQ8VIM6 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
StrcQ8VIM6 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
StrcQ8VIM6 Gm27046-201ENSMUST00000182160 463 ntBASIC16.2■□□□□ 0.18
StrcQ8VIM6 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
StrcQ8VIM6 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
StrcQ8VIM6 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
StrcQ8VIM6 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
StrcQ8VIM6 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
StrcQ8VIM6 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
StrcQ8VIM6 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
StrcQ8VIM6 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
StrcQ8VIM6 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
StrcQ8VIM6 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
StrcQ8VIM6 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
StrcQ8VIM6 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
StrcQ8VIM6 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
StrcQ8VIM6 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
StrcQ8VIM6 Gm5846-201ENSMUST00000193146 1414 ntBASIC16.2■□□□□ 0.18
StrcQ8VIM6 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
StrcQ8VIM6 Gm7899-201ENSMUST00000192935 1897 ntBASIC16.2■□□□□ 0.18
StrcQ8VIM6 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
StrcQ8VIM6 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
StrcQ8VIM6 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
StrcQ8VIM6 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC16.19■□□□□ 0.18
StrcQ8VIM6 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
StrcQ8VIM6 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC16.19■□□□□ 0.18
StrcQ8VIM6 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC16.19■□□□□ 0.18
StrcQ8VIM6 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC16.19■□□□□ 0.18
StrcQ8VIM6 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
StrcQ8VIM6 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
StrcQ8VIM6 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
StrcQ8VIM6 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
StrcQ8VIM6 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
StrcQ8VIM6 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
StrcQ8VIM6 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
StrcQ8VIM6 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
StrcQ8VIM6 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
StrcQ8VIM6 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
StrcQ8VIM6 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
StrcQ8VIM6 AC101945.2-201ENSMUST00000227886 1377 ntBASIC16.19■□□□□ 0.18
StrcQ8VIM6 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
StrcQ8VIM6 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
StrcQ8VIM6 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
StrcQ8VIM6 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
StrcQ8VIM6 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
StrcQ8VIM6 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC16.19■□□□□ 0.18
StrcQ8VIM6 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC16.19■□□□□ 0.18
StrcQ8VIM6 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC16.19■□□□□ 0.18
StrcQ8VIM6 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
StrcQ8VIM6 Gm27023-201ENSMUST00000182372 285 ntBASIC16.19■□□□□ 0.18
StrcQ8VIM6 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
StrcQ8VIM6 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC16.19■□□□□ 0.18
StrcQ8VIM6 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
StrcQ8VIM6 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
StrcQ8VIM6 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
StrcQ8VIM6 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms