Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TraipQ8VIG6 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TraipQ8VIG6 Mypopos-202ENSMUST00000205975 2321 ntBASIC14.84□□□□□ -0.03
TraipQ8VIG6 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TraipQ8VIG6 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TraipQ8VIG6 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TraipQ8VIG6 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TraipQ8VIG6 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
TraipQ8VIG6 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TraipQ8VIG6 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TraipQ8VIG6 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TraipQ8VIG6 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TraipQ8VIG6 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
TraipQ8VIG6 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TraipQ8VIG6 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TraipQ8VIG6 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TraipQ8VIG6 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TraipQ8VIG6 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
TraipQ8VIG6 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TraipQ8VIG6 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.84□□□□□ -0.03
TraipQ8VIG6 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.84□□□□□ -0.03
TraipQ8VIG6 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC14.84□□□□□ -0.03
TraipQ8VIG6 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TraipQ8VIG6 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TraipQ8VIG6 Gm5912-201ENSMUST00000122282 1438 ntBASIC14.83□□□□□ -0.03
TraipQ8VIG6 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TraipQ8VIG6 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.03
TraipQ8VIG6 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
TraipQ8VIG6 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TraipQ8VIG6 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TraipQ8VIG6 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
TraipQ8VIG6 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
TraipQ8VIG6 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
TraipQ8VIG6 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TraipQ8VIG6 AC161252.3-201ENSMUST00000225465 1549 ntBASIC14.83□□□□□ -0.04
TraipQ8VIG6 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TraipQ8VIG6 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TraipQ8VIG6 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TraipQ8VIG6 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
TraipQ8VIG6 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC14.83□□□□□ -0.04
TraipQ8VIG6 Gm13829-201ENSMUST00000119600 138 ntBASIC14.83□□□□□ -0.04
TraipQ8VIG6 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC14.83□□□□□ -0.04
TraipQ8VIG6 Gm12416-201ENSMUST00000120911 1008 ntBASIC14.83□□□□□ -0.04
TraipQ8VIG6 Gm16342-201ENSMUST00000124025 1025 ntBASIC14.83□□□□□ -0.04
TraipQ8VIG6 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TraipQ8VIG6 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TraipQ8VIG6 Gm6244-201ENSMUST00000178732 841 ntBASIC14.83□□□□□ -0.04
TraipQ8VIG6 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
TraipQ8VIG6 Gm8602-201ENSMUST00000184045 607 ntBASIC14.83□□□□□ -0.04
TraipQ8VIG6 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TraipQ8VIG6 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TraipQ8VIG6 Gm7287-201ENSMUST00000205267 602 ntBASIC14.83□□□□□ -0.04
TraipQ8VIG6 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
TraipQ8VIG6 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC14.83□□□□□ -0.04
TraipQ8VIG6 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TraipQ8VIG6 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TraipQ8VIG6 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TraipQ8VIG6 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TraipQ8VIG6 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
TraipQ8VIG6 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.83□□□□□ -0.04
TraipQ8VIG6 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
TraipQ8VIG6 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.83□□□□□ -0.04
TraipQ8VIG6 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TraipQ8VIG6 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
TraipQ8VIG6 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
TraipQ8VIG6 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TraipQ8VIG6 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TraipQ8VIG6 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TraipQ8VIG6 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TraipQ8VIG6 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
TraipQ8VIG6 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TraipQ8VIG6 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
TraipQ8VIG6 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TraipQ8VIG6 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TraipQ8VIG6 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TraipQ8VIG6 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC14.82□□□□□ -0.04
TraipQ8VIG6 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TraipQ8VIG6 Gm14730-201ENSMUST00000122378 1045 ntBASIC14.82□□□□□ -0.04
TraipQ8VIG6 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC14.82□□□□□ -0.04
TraipQ8VIG6 Gm15271-201ENSMUST00000134627 2110 ntTSL 5 BASIC14.82□□□□□ -0.04
TraipQ8VIG6 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC14.82□□□□□ -0.04
TraipQ8VIG6 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TraipQ8VIG6 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC14.82□□□□□ -0.04
TraipQ8VIG6 Gm2445-201ENSMUST00000182798 989 ntBASIC14.82□□□□□ -0.04
TraipQ8VIG6 Gm38223-201ENSMUST00000194484 695 ntBASIC14.82□□□□□ -0.04
TraipQ8VIG6 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC14.82□□□□□ -0.04
TraipQ8VIG6 Gm7498-201ENSMUST00000203282 1084 ntBASIC14.82□□□□□ -0.04
TraipQ8VIG6 Gm6983-201ENSMUST00000214912 628 ntBASIC14.82□□□□□ -0.04
TraipQ8VIG6 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TraipQ8VIG6 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TraipQ8VIG6 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TraipQ8VIG6 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TraipQ8VIG6 Gm5356-201ENSMUST00000093326 615 ntBASIC14.82□□□□□ -0.04
TraipQ8VIG6 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.82□□□□□ -0.04
TraipQ8VIG6 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
TraipQ8VIG6 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC14.82□□□□□ -0.04
TraipQ8VIG6 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TraipQ8VIG6 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
TraipQ8VIG6 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
TraipQ8VIG6 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms