Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh18Q8VHR0 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Pcdh18Q8VHR0 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh18Q8VHR0 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh18Q8VHR0 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.5□□□□□ -0.25
Pcdh18Q8VHR0 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh18Q8VHR0 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh18Q8VHR0 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh18Q8VHR0 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.5□□□□□ -0.25
Pcdh18Q8VHR0 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh18Q8VHR0 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC13.5□□□□□ -0.25
Pcdh18Q8VHR0 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC13.5□□□□□ -0.25
Pcdh18Q8VHR0 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Pcdh18Q8VHR0 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC13.5□□□□□ -0.25
Pcdh18Q8VHR0 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC13.5□□□□□ -0.25
Pcdh18Q8VHR0 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC13.5□□□□□ -0.25
Pcdh18Q8VHR0 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh18Q8VHR0 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh18Q8VHR0 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC13.5□□□□□ -0.25
Pcdh18Q8VHR0 Gm18733-201ENSMUST00000173950 856 ntBASIC13.5□□□□□ -0.25
Pcdh18Q8VHR0 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh18Q8VHR0 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh18Q8VHR0 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC13.5□□□□□ -0.25
Pcdh18Q8VHR0 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC13.5□□□□□ -0.25
Pcdh18Q8VHR0 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh18Q8VHR0 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh18Q8VHR0 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh18Q8VHR0 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh18Q8VHR0 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC13.5□□□□□ -0.25
Pcdh18Q8VHR0 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh18Q8VHR0 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Pcdh18Q8VHR0 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh18Q8VHR0 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh18Q8VHR0 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh18Q8VHR0 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh18Q8VHR0 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh18Q8VHR0 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Pcdh18Q8VHR0 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
Pcdh18Q8VHR0 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
Pcdh18Q8VHR0 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh18Q8VHR0 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Pcdh18Q8VHR0 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13.5□□□□□ -0.25
Pcdh18Q8VHR0 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh18Q8VHR0 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh18Q8VHR0 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh18Q8VHR0 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh18Q8VHR0 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh18Q8VHR0 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh18Q8VHR0 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh18Q8VHR0 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh18Q8VHR0 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Pcdh18Q8VHR0 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Pcdh18Q8VHR0 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.49□□□□□ -0.25
Pcdh18Q8VHR0 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Pcdh18Q8VHR0 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Pcdh18Q8VHR0 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh18Q8VHR0 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.49□□□□□ -0.25
Pcdh18Q8VHR0 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh18Q8VHR0 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh18Q8VHR0 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh18Q8VHR0 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh18Q8VHR0 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Pcdh18Q8VHR0 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Pcdh18Q8VHR0 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh18Q8VHR0 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh18Q8VHR0 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC13.49□□□□□ -0.25
Pcdh18Q8VHR0 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC13.49□□□□□ -0.25
Pcdh18Q8VHR0 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC13.49□□□□□ -0.25
Pcdh18Q8VHR0 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC13.49□□□□□ -0.25
Pcdh18Q8VHR0 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh18Q8VHR0 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh18Q8VHR0 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh18Q8VHR0 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Pcdh18Q8VHR0 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC13.49□□□□□ -0.25
Pcdh18Q8VHR0 Gm10154-201ENSMUST00000084445 354 ntBASIC13.49□□□□□ -0.25
Pcdh18Q8VHR0 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh18Q8VHR0 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh18Q8VHR0 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh18Q8VHR0 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh18Q8VHR0 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh18Q8VHR0 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh18Q8VHR0 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh18Q8VHR0 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh18Q8VHR0 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh18Q8VHR0 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh18Q8VHR0 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh18Q8VHR0 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh18Q8VHR0 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh18Q8VHR0 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.48□□□□□ -0.25
Pcdh18Q8VHR0 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh18Q8VHR0 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh18Q8VHR0 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh18Q8VHR0 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh18Q8VHR0 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh18Q8VHR0 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh18Q8VHR0 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Pcdh18Q8VHR0 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh18Q8VHR0 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh18Q8VHR0 AC164426.2-201ENSMUST00000225993 2492 ntBASIC13.48□□□□□ -0.25
Pcdh18Q8VHR0 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 97.6 ms