Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ddx39aQ8VDW0 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Ddx39aQ8VDW0 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Ddx39aQ8VDW0 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ddx39aQ8VDW0 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ddx39aQ8VDW0 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ddx39aQ8VDW0 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Ddx39aQ8VDW0 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ddx39aQ8VDW0 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ddx39aQ8VDW0 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ddx39aQ8VDW0 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Ddx39aQ8VDW0 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ddx39aQ8VDW0 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Ddx39aQ8VDW0 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ddx39aQ8VDW0 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC15.48■□□□□ 0.07
Ddx39aQ8VDW0 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC15.48■□□□□ 0.07
Ddx39aQ8VDW0 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Ddx39aQ8VDW0 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC15.48■□□□□ 0.07
Ddx39aQ8VDW0 Gm43094-201ENSMUST00000196549 921 ntBASIC15.48■□□□□ 0.07
Ddx39aQ8VDW0 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC15.48■□□□□ 0.07
Ddx39aQ8VDW0 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC15.48■□□□□ 0.07
Ddx39aQ8VDW0 AC150560.1-201ENSMUST00000227731 1187 ntBASIC15.48■□□□□ 0.07
Ddx39aQ8VDW0 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
Ddx39aQ8VDW0 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Ddx39aQ8VDW0 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ddx39aQ8VDW0 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Ddx39aQ8VDW0 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ddx39aQ8VDW0 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Ddx39aQ8VDW0 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Ddx39aQ8VDW0 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ddx39aQ8VDW0 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Ddx39aQ8VDW0 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ddx39aQ8VDW0 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ddx39aQ8VDW0 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ddx39aQ8VDW0 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Ddx39aQ8VDW0 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Ddx39aQ8VDW0 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
Ddx39aQ8VDW0 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ddx39aQ8VDW0 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ddx39aQ8VDW0 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ddx39aQ8VDW0 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ddx39aQ8VDW0 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC15.47■□□□□ 0.07
Ddx39aQ8VDW0 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ddx39aQ8VDW0 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Ddx39aQ8VDW0 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Ddx39aQ8VDW0 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
Ddx39aQ8VDW0 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Ddx39aQ8VDW0 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC15.47■□□□□ 0.07
Ddx39aQ8VDW0 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC15.47■□□□□ 0.07
Ddx39aQ8VDW0 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC15.47■□□□□ 0.07
Ddx39aQ8VDW0 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ddx39aQ8VDW0 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ddx39aQ8VDW0 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ddx39aQ8VDW0 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Ddx39aQ8VDW0 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ddx39aQ8VDW0 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ddx39aQ8VDW0 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ddx39aQ8VDW0 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Ddx39aQ8VDW0 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ddx39aQ8VDW0 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ddx39aQ8VDW0 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Ddx39aQ8VDW0 AC159196.2-201ENSMUST00000224082 1622 ntBASIC15.46■□□□□ 0.07
Ddx39aQ8VDW0 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ddx39aQ8VDW0 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ddx39aQ8VDW0 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ddx39aQ8VDW0 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ddx39aQ8VDW0 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ddx39aQ8VDW0 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ddx39aQ8VDW0 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
Ddx39aQ8VDW0 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ddx39aQ8VDW0 Mir692-1-201ENSMUST00000102263 109 ntBASIC15.46■□□□□ 0.07
Ddx39aQ8VDW0 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ddx39aQ8VDW0 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ddx39aQ8VDW0 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Ddx39aQ8VDW0 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC15.46■□□□□ 0.07
Ddx39aQ8VDW0 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC15.46■□□□□ 0.07
Ddx39aQ8VDW0 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC15.46■□□□□ 0.07
Ddx39aQ8VDW0 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ddx39aQ8VDW0 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ddx39aQ8VDW0 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ddx39aQ8VDW0 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ddx39aQ8VDW0 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Ddx39aQ8VDW0 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Ddx39aQ8VDW0 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Ddx39aQ8VDW0 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Ddx39aQ8VDW0 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Ddx39aQ8VDW0 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Ddx39aQ8VDW0 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Ddx39aQ8VDW0 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ddx39aQ8VDW0 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ddx39aQ8VDW0 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ddx39aQ8VDW0 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ddx39aQ8VDW0 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ddx39aQ8VDW0 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Ddx39aQ8VDW0 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ddx39aQ8VDW0 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ddx39aQ8VDW0 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ddx39aQ8VDW0 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ddx39aQ8VDW0 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC15.45■□□□□ 0.06
Ddx39aQ8VDW0 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms