Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf8Q8VC56 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rnf8Q8VC56 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Rnf8Q8VC56 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rnf8Q8VC56 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rnf8Q8VC56 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rnf8Q8VC56 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rnf8Q8VC56 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rnf8Q8VC56 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Rnf8Q8VC56 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rnf8Q8VC56 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Rnf8Q8VC56 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Rnf8Q8VC56 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Rnf8Q8VC56 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC13.49□□□□□ -0.25
Rnf8Q8VC56 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Rnf8Q8VC56 Gm27920-201ENSMUST00000183953 96 ntBASIC13.49□□□□□ -0.25
Rnf8Q8VC56 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Rnf8Q8VC56 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC13.49□□□□□ -0.25
Rnf8Q8VC56 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC13.49□□□□□ -0.25
Rnf8Q8VC56 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC13.49□□□□□ -0.25
Rnf8Q8VC56 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC13.49□□□□□ -0.25
Rnf8Q8VC56 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rnf8Q8VC56 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
Rnf8Q8VC56 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Rnf8Q8VC56 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rnf8Q8VC56 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rnf8Q8VC56 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Rnf8Q8VC56 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rnf8Q8VC56 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rnf8Q8VC56 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rnf8Q8VC56 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Rnf8Q8VC56 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rnf8Q8VC56 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Rnf8Q8VC56 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Rnf8Q8VC56 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC13.49□□□□□ -0.25
Rnf8Q8VC56 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rnf8Q8VC56 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.49□□□□□ -0.25
Rnf8Q8VC56 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rnf8Q8VC56 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rnf8Q8VC56 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC13.48□□□□□ -0.25
Rnf8Q8VC56 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Rnf8Q8VC56 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.48□□□□□ -0.25
Rnf8Q8VC56 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
Rnf8Q8VC56 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rnf8Q8VC56 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.48□□□□□ -0.25
Rnf8Q8VC56 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Rnf8Q8VC56 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rnf8Q8VC56 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Rnf8Q8VC56 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rnf8Q8VC56 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rnf8Q8VC56 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC13.48□□□□□ -0.25
Rnf8Q8VC56 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rnf8Q8VC56 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rnf8Q8VC56 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rnf8Q8VC56 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC13.48□□□□□ -0.25
Rnf8Q8VC56 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC13.48□□□□□ -0.25
Rnf8Q8VC56 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rnf8Q8VC56 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Rnf8Q8VC56 Gm38225-201ENSMUST00000194001 393 ntBASIC13.48□□□□□ -0.25
Rnf8Q8VC56 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rnf8Q8VC56 AC166341.4-201ENSMUST00000220625 123 ntBASIC13.48□□□□□ -0.25
Rnf8Q8VC56 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rnf8Q8VC56 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC13.48□□□□□ -0.25
Rnf8Q8VC56 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rnf8Q8VC56 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rnf8Q8VC56 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Rnf8Q8VC56 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rnf8Q8VC56 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Rnf8Q8VC56 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Rnf8Q8VC56 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rnf8Q8VC56 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rnf8Q8VC56 Mypopos-202ENSMUST00000205975 2321 ntBASIC13.48□□□□□ -0.25
Rnf8Q8VC56 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rnf8Q8VC56 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Rnf8Q8VC56 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.48□□□□□ -0.25
Rnf8Q8VC56 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.48□□□□□ -0.25
Rnf8Q8VC56 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
Rnf8Q8VC56 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Rnf8Q8VC56 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Rnf8Q8VC56 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rnf8Q8VC56 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rnf8Q8VC56 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rnf8Q8VC56 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.48□□□□□ -0.25
Rnf8Q8VC56 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.48□□□□□ -0.25
Rnf8Q8VC56 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rnf8Q8VC56 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf8Q8VC56 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf8Q8VC56 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf8Q8VC56 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf8Q8VC56 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf8Q8VC56 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf8Q8VC56 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13.47□□□□□ -0.25
Rnf8Q8VC56 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf8Q8VC56 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf8Q8VC56 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf8Q8VC56 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf8Q8VC56 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf8Q8VC56 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf8Q8VC56 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
Rnf8Q8VC56 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms