Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps39Q8R5L3 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps39Q8R5L3 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Vps39Q8R5L3 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps39Q8R5L3 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps39Q8R5L3 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC14□□□□□ -0.17
Vps39Q8R5L3 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC14□□□□□ -0.17
Vps39Q8R5L3 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC14□□□□□ -0.17
Vps39Q8R5L3 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps39Q8R5L3 Mir6990-201ENSMUST00000183724 91 ntBASIC14□□□□□ -0.17
Vps39Q8R5L3 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps39Q8R5L3 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Vps39Q8R5L3 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Vps39Q8R5L3 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps39Q8R5L3 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC14□□□□□ -0.17
Vps39Q8R5L3 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps39Q8R5L3 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps39Q8R5L3 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Vps39Q8R5L3 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps39Q8R5L3 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC14□□□□□ -0.17
Vps39Q8R5L3 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14□□□□□ -0.17
Vps39Q8R5L3 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vps39Q8R5L3 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.99□□□□□ -0.17
Vps39Q8R5L3 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vps39Q8R5L3 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vps39Q8R5L3 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.99□□□□□ -0.17
Vps39Q8R5L3 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vps39Q8R5L3 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vps39Q8R5L3 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vps39Q8R5L3 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vps39Q8R5L3 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vps39Q8R5L3 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vps39Q8R5L3 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC13.99□□□□□ -0.17
Vps39Q8R5L3 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Vps39Q8R5L3 AC225888.1-201ENSMUST00000227184 728 ntBASIC13.99□□□□□ -0.17
Vps39Q8R5L3 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vps39Q8R5L3 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vps39Q8R5L3 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vps39Q8R5L3 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vps39Q8R5L3 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vps39Q8R5L3 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vps39Q8R5L3 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Vps39Q8R5L3 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vps39Q8R5L3 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vps39Q8R5L3 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Vps39Q8R5L3 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Vps39Q8R5L3 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps39Q8R5L3 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps39Q8R5L3 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps39Q8R5L3 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps39Q8R5L3 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps39Q8R5L3 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.98□□□□□ -0.17
Vps39Q8R5L3 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps39Q8R5L3 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Vps39Q8R5L3 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps39Q8R5L3 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps39Q8R5L3 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps39Q8R5L3 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps39Q8R5L3 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps39Q8R5L3 Gm13015-201ENSMUST00000118674 204 ntBASIC13.98□□□□□ -0.17
Vps39Q8R5L3 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC13.98□□□□□ -0.17
Vps39Q8R5L3 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC13.98□□□□□ -0.17
Vps39Q8R5L3 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Vps39Q8R5L3 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Vps39Q8R5L3 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC13.98□□□□□ -0.17
Vps39Q8R5L3 Gm27631-201ENSMUST00000184163 466 ntBASIC13.98□□□□□ -0.17
Vps39Q8R5L3 Gm43125-201ENSMUST00000201724 730 ntBASIC13.98□□□□□ -0.17
Vps39Q8R5L3 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC13.98□□□□□ -0.17
Vps39Q8R5L3 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Vps39Q8R5L3 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Vps39Q8R5L3 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.98□□□□□ -0.17
Vps39Q8R5L3 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Vps39Q8R5L3 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Vps39Q8R5L3 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps39Q8R5L3 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps39Q8R5L3 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps39Q8R5L3 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps39Q8R5L3 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps39Q8R5L3 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps39Q8R5L3 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps39Q8R5L3 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.98□□□□□ -0.17
Vps39Q8R5L3 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps39Q8R5L3 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps39Q8R5L3 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps39Q8R5L3 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps39Q8R5L3 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps39Q8R5L3 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.98□□□□□ -0.17
Vps39Q8R5L3 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Vps39Q8R5L3 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps39Q8R5L3 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps39Q8R5L3 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps39Q8R5L3 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps39Q8R5L3 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.97□□□□□ -0.17
Vps39Q8R5L3 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps39Q8R5L3 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps39Q8R5L3 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps39Q8R5L3 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Vps39Q8R5L3 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC13.97□□□□□ -0.17
Vps39Q8R5L3 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC13.97□□□□□ -0.17
Vps39Q8R5L3 Gm43073-201ENSMUST00000198200 1189 ntBASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms