Protein–RNA interactions for Protein: Q8R3Q6

Ccdc58, Coiled-coil domain-containing protein 58, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58Q8R3Q6 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC12.56□□□□□ -0.4
Ccdc58Q8R3Q6 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC12.56□□□□□ -0.4
Ccdc58Q8R3Q6 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC12.56□□□□□ -0.4
Ccdc58Q8R3Q6 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC12.56□□□□□ -0.4
Ccdc58Q8R3Q6 Gm45747-201ENSMUST00000212203 999 ntBASIC12.56□□□□□ -0.4
Ccdc58Q8R3Q6 AV026068-213ENSMUST00000223675 1171 ntBASIC12.56□□□□□ -0.4
Ccdc58Q8R3Q6 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc58Q8R3Q6 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc58Q8R3Q6 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc58Q8R3Q6 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC12.56□□□□□ -0.4
Ccdc58Q8R3Q6 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Ccdc58Q8R3Q6 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc58Q8R3Q6 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Ccdc58Q8R3Q6 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc58Q8R3Q6 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc58Q8R3Q6 AC121801.1-201ENSMUST00000225363 1899 ntBASIC12.56□□□□□ -0.4
Ccdc58Q8R3Q6 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc58Q8R3Q6 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc58Q8R3Q6 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc58Q8R3Q6 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Ccdc58Q8R3Q6 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc58Q8R3Q6 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc58Q8R3Q6 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc58Q8R3Q6 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc58Q8R3Q6 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Ccdc58Q8R3Q6 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc58Q8R3Q6 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc58Q8R3Q6 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Ccdc58Q8R3Q6 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.55□□□□□ -0.4
Ccdc58Q8R3Q6 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.55□□□□□ -0.4
Ccdc58Q8R3Q6 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc58Q8R3Q6 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc58Q8R3Q6 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc58Q8R3Q6 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc58Q8R3Q6 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
Ccdc58Q8R3Q6 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc58Q8R3Q6 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc58Q8R3Q6 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc58Q8R3Q6 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Ccdc58Q8R3Q6 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc58Q8R3Q6 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc58Q8R3Q6 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC12.55□□□□□ -0.4
Ccdc58Q8R3Q6 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc58Q8R3Q6 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC12.55□□□□□ -0.4
Ccdc58Q8R3Q6 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc58Q8R3Q6 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc58Q8R3Q6 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc58Q8R3Q6 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc58Q8R3Q6 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc58Q8R3Q6 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc58Q8R3Q6 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc58Q8R3Q6 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc58Q8R3Q6 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc58Q8R3Q6 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc58Q8R3Q6 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC12.55□□□□□ -0.4
Ccdc58Q8R3Q6 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc58Q8R3Q6 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc58Q8R3Q6 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc58Q8R3Q6 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc58Q8R3Q6 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc58Q8R3Q6 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc58Q8R3Q6 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc58Q8R3Q6 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc58Q8R3Q6 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc58Q8R3Q6 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc58Q8R3Q6 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Ccdc58Q8R3Q6 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc58Q8R3Q6 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc58Q8R3Q6 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc58Q8R3Q6 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc58Q8R3Q6 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc58Q8R3Q6 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc58Q8R3Q6 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC12.54□□□□□ -0.4
Ccdc58Q8R3Q6 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc58Q8R3Q6 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC12.54□□□□□ -0.4
Ccdc58Q8R3Q6 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC12.54□□□□□ -0.4
Ccdc58Q8R3Q6 Gm42670-201ENSMUST00000201816 1292 ntBASIC12.54□□□□□ -0.4
Ccdc58Q8R3Q6 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC12.54□□□□□ -0.4
Ccdc58Q8R3Q6 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc58Q8R3Q6 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc58Q8R3Q6 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc58Q8R3Q6 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC12.54□□□□□ -0.4
Ccdc58Q8R3Q6 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC12.54□□□□□ -0.4
Ccdc58Q8R3Q6 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc58Q8R3Q6 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc58Q8R3Q6 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc58Q8R3Q6 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Ccdc58Q8R3Q6 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc58Q8R3Q6 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc58Q8R3Q6 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc58Q8R3Q6 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Ccdc58Q8R3Q6 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc58Q8R3Q6 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Ccdc58Q8R3Q6 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc58Q8R3Q6 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc58Q8R3Q6 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc58Q8R3Q6 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc58Q8R3Q6 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc58Q8R3Q6 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc58Q8R3Q6 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms