Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rpp40Q8R1F9 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC14.95□□□□□ -0.02
Rpp40Q8R1F9 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rpp40Q8R1F9 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Rpp40Q8R1F9 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rpp40Q8R1F9 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rpp40Q8R1F9 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Rpp40Q8R1F9 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC14.95□□□□□ -0.02
Rpp40Q8R1F9 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rpp40Q8R1F9 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rpp40Q8R1F9 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rpp40Q8R1F9 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rpp40Q8R1F9 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Rpp40Q8R1F9 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rpp40Q8R1F9 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rpp40Q8R1F9 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Rpp40Q8R1F9 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rpp40Q8R1F9 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rpp40Q8R1F9 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rpp40Q8R1F9 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rpp40Q8R1F9 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rpp40Q8R1F9 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rpp40Q8R1F9 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Rpp40Q8R1F9 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rpp40Q8R1F9 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Rpp40Q8R1F9 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Rpp40Q8R1F9 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC14.94□□□□□ -0.02
Rpp40Q8R1F9 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC14.94□□□□□ -0.02
Rpp40Q8R1F9 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rpp40Q8R1F9 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC14.94□□□□□ -0.02
Rpp40Q8R1F9 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC14.94□□□□□ -0.02
Rpp40Q8R1F9 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Rpp40Q8R1F9 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC14.94□□□□□ -0.02
Rpp40Q8R1F9 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC14.94□□□□□ -0.02
Rpp40Q8R1F9 Gm2445-201ENSMUST00000182798 989 ntBASIC14.94□□□□□ -0.02
Rpp40Q8R1F9 H2-Pa-201ENSMUST00000182803 626 ntBASIC14.94□□□□□ -0.02
Rpp40Q8R1F9 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Rpp40Q8R1F9 Gm5279-201ENSMUST00000199575 745 ntBASIC14.94□□□□□ -0.02
Rpp40Q8R1F9 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC14.94□□□□□ -0.02
Rpp40Q8R1F9 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Rpp40Q8R1F9 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Rpp40Q8R1F9 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rpp40Q8R1F9 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rpp40Q8R1F9 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Rpp40Q8R1F9 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rpp40Q8R1F9 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rpp40Q8R1F9 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.94□□□□□ -0.02
Rpp40Q8R1F9 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Rpp40Q8R1F9 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rpp40Q8R1F9 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rpp40Q8R1F9 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rpp40Q8R1F9 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rpp40Q8R1F9 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rpp40Q8R1F9 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC14.93□□□□□ -0.02
Rpp40Q8R1F9 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Rpp40Q8R1F9 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rpp40Q8R1F9 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rpp40Q8R1F9 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.93□□□□□ -0.02
Rpp40Q8R1F9 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
Rpp40Q8R1F9 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rpp40Q8R1F9 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rpp40Q8R1F9 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rpp40Q8R1F9 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rpp40Q8R1F9 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rpp40Q8R1F9 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
Rpp40Q8R1F9 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rpp40Q8R1F9 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Rpp40Q8R1F9 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Rpp40Q8R1F9 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Rpp40Q8R1F9 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Rpp40Q8R1F9 Mir698-201ENSMUST00000102164 109 ntBASIC14.93□□□□□ -0.02
Rpp40Q8R1F9 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC14.93□□□□□ -0.02
Rpp40Q8R1F9 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rpp40Q8R1F9 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Rpp40Q8R1F9 Gm24420-201ENSMUST00000176676 59 ntBASIC14.93□□□□□ -0.02
Rpp40Q8R1F9 Gm28631-201ENSMUST00000190740 334 ntBASIC14.93□□□□□ -0.02
Rpp40Q8R1F9 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC14.93□□□□□ -0.02
Rpp40Q8R1F9 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rpp40Q8R1F9 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rpp40Q8R1F9 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Rpp40Q8R1F9 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Rpp40Q8R1F9 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rpp40Q8R1F9 Gm5421-201ENSMUST00000181698 2354 ntBASIC14.93□□□□□ -0.02
Rpp40Q8R1F9 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rpp40Q8R1F9 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rpp40Q8R1F9 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rpp40Q8R1F9 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
Rpp40Q8R1F9 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Rpp40Q8R1F9 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rpp40Q8R1F9 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rpp40Q8R1F9 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rpp40Q8R1F9 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rpp40Q8R1F9 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
Rpp40Q8R1F9 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rpp40Q8R1F9 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Rpp40Q8R1F9 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rpp40Q8R1F9 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rpp40Q8R1F9 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Rpp40Q8R1F9 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.92□□□□□ -0.02
Rpp40Q8R1F9 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms