Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Atf7Q8R0S1 Gm21470-201ENSMUST00000187680 696 ntBASIC16.49■□□□□ 0.23
Atf7Q8R0S1 Gm44344-201ENSMUST00000200287 129 ntBASIC16.49■□□□□ 0.23
Atf7Q8R0S1 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Atf7Q8R0S1 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Atf7Q8R0S1 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Atf7Q8R0S1 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Atf7Q8R0S1 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Atf7Q8R0S1 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Atf7Q8R0S1 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Atf7Q8R0S1 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Atf7Q8R0S1 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Atf7Q8R0S1 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Atf7Q8R0S1 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Atf7Q8R0S1 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Atf7Q8R0S1 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC16.48■□□□□ 0.23
Atf7Q8R0S1 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Atf7Q8R0S1 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Atf7Q8R0S1 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Atf7Q8R0S1 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Atf7Q8R0S1 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Atf7Q8R0S1 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Atf7Q8R0S1 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Atf7Q8R0S1 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Atf7Q8R0S1 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC16.48■□□□□ 0.23
Atf7Q8R0S1 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Atf7Q8R0S1 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Atf7Q8R0S1 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Atf7Q8R0S1 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Atf7Q8R0S1 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Atf7Q8R0S1 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Atf7Q8R0S1 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Atf7Q8R0S1 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
Atf7Q8R0S1 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Atf7Q8R0S1 Gm14767-201ENSMUST00000121559 586 ntBASIC16.48■□□□□ 0.23
Atf7Q8R0S1 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Atf7Q8R0S1 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Atf7Q8R0S1 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Atf7Q8R0S1 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Atf7Q8R0S1 Ighv1-51-201ENSMUST00000192903 354 ntBASIC16.48■□□□□ 0.23
Atf7Q8R0S1 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Atf7Q8R0S1 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Atf7Q8R0S1 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Atf7Q8R0S1 Mir497b-201ENSMUST00000093601 125 ntBASIC16.48■□□□□ 0.23
Atf7Q8R0S1 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Atf7Q8R0S1 Gm5320-201ENSMUST00000207163 1519 ntBASIC16.48■□□□□ 0.23
Atf7Q8R0S1 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Atf7Q8R0S1 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Atf7Q8R0S1 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Atf7Q8R0S1 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Atf7Q8R0S1 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Atf7Q8R0S1 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Atf7Q8R0S1 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Atf7Q8R0S1 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Atf7Q8R0S1 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Atf7Q8R0S1 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Atf7Q8R0S1 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Atf7Q8R0S1 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Atf7Q8R0S1 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Atf7Q8R0S1 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Atf7Q8R0S1 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Atf7Q8R0S1 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Atf7Q8R0S1 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Atf7Q8R0S1 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Atf7Q8R0S1 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Atf7Q8R0S1 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Atf7Q8R0S1 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Atf7Q8R0S1 AC159649.2-201ENSMUST00000222984 3223 ntBASIC16.47■□□□□ 0.23
Atf7Q8R0S1 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Atf7Q8R0S1 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Atf7Q8R0S1 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC16.47■□□□□ 0.23
Atf7Q8R0S1 Gm27321-201ENSMUST00000185021 205 ntBASIC16.47■□□□□ 0.23
Atf7Q8R0S1 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC16.47■□□□□ 0.23
Atf7Q8R0S1 Gm43703-201ENSMUST00000200523 763 ntBASIC16.47■□□□□ 0.23
Atf7Q8R0S1 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Atf7Q8R0S1 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Atf7Q8R0S1 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Atf7Q8R0S1 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Atf7Q8R0S1 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Atf7Q8R0S1 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Atf7Q8R0S1 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC16.47■□□□□ 0.23
Atf7Q8R0S1 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Atf7Q8R0S1 Zkscan14-203ENSMUST00000198959 2243 ntBASIC16.47■□□□□ 0.23
Atf7Q8R0S1 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Atf7Q8R0S1 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Atf7Q8R0S1 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Atf7Q8R0S1 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC16.47■□□□□ 0.23
Atf7Q8R0S1 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
Atf7Q8R0S1 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Atf7Q8R0S1 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Atf7Q8R0S1 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Atf7Q8R0S1 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC16.46■□□□□ 0.23
Atf7Q8R0S1 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Atf7Q8R0S1 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Atf7Q8R0S1 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Atf7Q8R0S1 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Atf7Q8R0S1 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Atf7Q8R0S1 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Atf7Q8R0S1 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Atf7Q8R0S1 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms