Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ebf4Q8K4J2 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.72□□□□□ -0.37
Ebf4Q8K4J2 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ebf4Q8K4J2 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Ebf4Q8K4J2 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ebf4Q8K4J2 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ebf4Q8K4J2 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.72□□□□□ -0.37
Ebf4Q8K4J2 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ebf4Q8K4J2 Gm13418-201ENSMUST00000119097 944 ntBASIC12.72□□□□□ -0.37
Ebf4Q8K4J2 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ebf4Q8K4J2 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
Ebf4Q8K4J2 Gm10275-202ENSMUST00000168697 495 ntBASIC12.72□□□□□ -0.37
Ebf4Q8K4J2 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Ebf4Q8K4J2 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
Ebf4Q8K4J2 Gm7787-201ENSMUST00000216858 688 ntBASIC12.72□□□□□ -0.37
Ebf4Q8K4J2 AC154471.1-201ENSMUST00000224418 436 ntBASIC12.72□□□□□ -0.37
Ebf4Q8K4J2 Gm10275-201ENSMUST00000092620 635 ntBASIC12.72□□□□□ -0.37
Ebf4Q8K4J2 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ebf4Q8K4J2 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ebf4Q8K4J2 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ebf4Q8K4J2 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ebf4Q8K4J2 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ebf4Q8K4J2 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ebf4Q8K4J2 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ebf4Q8K4J2 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ebf4Q8K4J2 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ebf4Q8K4J2 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ebf4Q8K4J2 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ebf4Q8K4J2 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ebf4Q8K4J2 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ebf4Q8K4J2 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Ebf4Q8K4J2 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ebf4Q8K4J2 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Ebf4Q8K4J2 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ebf4Q8K4J2 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC12.72□□□□□ -0.37
Ebf4Q8K4J2 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ebf4Q8K4J2 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC12.71□□□□□ -0.37
Ebf4Q8K4J2 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ebf4Q8K4J2 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
Ebf4Q8K4J2 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.71□□□□□ -0.37
Ebf4Q8K4J2 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ebf4Q8K4J2 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Ebf4Q8K4J2 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ebf4Q8K4J2 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ebf4Q8K4J2 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ebf4Q8K4J2 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Ebf4Q8K4J2 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ebf4Q8K4J2 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ebf4Q8K4J2 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ebf4Q8K4J2 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ebf4Q8K4J2 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC12.71□□□□□ -0.37
Ebf4Q8K4J2 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ebf4Q8K4J2 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Ebf4Q8K4J2 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ebf4Q8K4J2 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC12.71□□□□□ -0.37
Ebf4Q8K4J2 Gm6089-201ENSMUST00000197666 938 ntBASIC12.71□□□□□ -0.37
Ebf4Q8K4J2 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC12.71□□□□□ -0.37
Ebf4Q8K4J2 Gm45747-201ENSMUST00000212203 999 ntBASIC12.71□□□□□ -0.37
Ebf4Q8K4J2 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ebf4Q8K4J2 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ebf4Q8K4J2 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ebf4Q8K4J2 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ebf4Q8K4J2 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ebf4Q8K4J2 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ebf4Q8K4J2 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ebf4Q8K4J2 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ebf4Q8K4J2 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ebf4Q8K4J2 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.71□□□□□ -0.38
Ebf4Q8K4J2 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ebf4Q8K4J2 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ebf4Q8K4J2 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ebf4Q8K4J2 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Ebf4Q8K4J2 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ebf4Q8K4J2 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ebf4Q8K4J2 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ebf4Q8K4J2 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ebf4Q8K4J2 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ebf4Q8K4J2 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ebf4Q8K4J2 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.7□□□□□ -0.38
Ebf4Q8K4J2 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ebf4Q8K4J2 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ebf4Q8K4J2 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ebf4Q8K4J2 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ebf4Q8K4J2 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Ebf4Q8K4J2 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC12.7□□□□□ -0.38
Ebf4Q8K4J2 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC12.7□□□□□ -0.38
Ebf4Q8K4J2 Ank2-226ENSMUST00000189368 339 ntBASIC12.7□□□□□ -0.38
Ebf4Q8K4J2 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Ebf4Q8K4J2 Gm45167-201ENSMUST00000208007 322 ntBASIC12.7□□□□□ -0.38
Ebf4Q8K4J2 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ebf4Q8K4J2 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ebf4Q8K4J2 Spr-ps1-201ENSMUST00000089584 605 ntBASIC12.7□□□□□ -0.38
Ebf4Q8K4J2 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ebf4Q8K4J2 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ebf4Q8K4J2 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ebf4Q8K4J2 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ebf4Q8K4J2 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC12.7□□□□□ -0.38
Ebf4Q8K4J2 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ebf4Q8K4J2 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ebf4Q8K4J2 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms