Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cchcr1Q8K2I2 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC16.53■□□□□ 0.24
Cchcr1Q8K2I2 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cchcr1Q8K2I2 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC16.53■□□□□ 0.24
Cchcr1Q8K2I2 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cchcr1Q8K2I2 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Cchcr1Q8K2I2 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Cchcr1Q8K2I2 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cchcr1Q8K2I2 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cchcr1Q8K2I2 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cchcr1Q8K2I2 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cchcr1Q8K2I2 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Cchcr1Q8K2I2 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cchcr1Q8K2I2 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cchcr1Q8K2I2 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC16.52■□□□□ 0.24
Cchcr1Q8K2I2 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC16.52■□□□□ 0.24
Cchcr1Q8K2I2 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cchcr1Q8K2I2 Gm22065-201ENSMUST00000103753 110 ntBASIC16.52■□□□□ 0.24
Cchcr1Q8K2I2 Gm22066-201ENSMUST00000103761 110 ntBASIC16.52■□□□□ 0.24
Cchcr1Q8K2I2 Gm24932-201ENSMUST00000103763 110 ntBASIC16.52■□□□□ 0.24
Cchcr1Q8K2I2 Gm24115-201ENSMUST00000103799 110 ntBASIC16.52■□□□□ 0.24
Cchcr1Q8K2I2 Gm22190-201ENSMUST00000103827 110 ntBASIC16.52■□□□□ 0.24
Cchcr1Q8K2I2 Gm22191-201ENSMUST00000103831 110 ntBASIC16.52■□□□□ 0.24
Cchcr1Q8K2I2 Gm24721-201ENSMUST00000103849 110 ntBASIC16.52■□□□□ 0.24
Cchcr1Q8K2I2 Gm28018-201ENSMUST00000103869 110 ntBASIC16.52■□□□□ 0.24
Cchcr1Q8K2I2 Gm26399-201ENSMUST00000103937 110 ntBASIC16.52■□□□□ 0.24
Cchcr1Q8K2I2 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cchcr1Q8K2I2 Gm25349-201ENSMUST00000177728 110 ntBASIC16.52■□□□□ 0.24
Cchcr1Q8K2I2 Gm23616-201ENSMUST00000177797 110 ntBASIC16.52■□□□□ 0.24
Cchcr1Q8K2I2 Gm25871-201ENSMUST00000177816 110 ntBASIC16.52■□□□□ 0.24
Cchcr1Q8K2I2 Gm24752-201ENSMUST00000178240 110 ntBASIC16.52■□□□□ 0.24
Cchcr1Q8K2I2 Gm24496-201ENSMUST00000178287 110 ntBASIC16.52■□□□□ 0.24
Cchcr1Q8K2I2 Gm25649-201ENSMUST00000178476 110 ntBASIC16.52■□□□□ 0.24
Cchcr1Q8K2I2 Gm25548-201ENSMUST00000178681 110 ntBASIC16.52■□□□□ 0.24
Cchcr1Q8K2I2 Gm23147-201ENSMUST00000178841 110 ntBASIC16.52■□□□□ 0.24
Cchcr1Q8K2I2 Gm26095-201ENSMUST00000179270 110 ntBASIC16.52■□□□□ 0.24
Cchcr1Q8K2I2 Gm22171-201ENSMUST00000179283 110 ntBASIC16.52■□□□□ 0.24
Cchcr1Q8K2I2 Gm23936-201ENSMUST00000179354 110 ntBASIC16.52■□□□□ 0.24
Cchcr1Q8K2I2 Gm22619-201ENSMUST00000179516 110 ntBASIC16.52■□□□□ 0.24
Cchcr1Q8K2I2 Gm25255-201ENSMUST00000179579 110 ntBASIC16.52■□□□□ 0.24
Cchcr1Q8K2I2 Gm24755-201ENSMUST00000179691 110 ntBASIC16.52■□□□□ 0.24
Cchcr1Q8K2I2 Gm26506-201ENSMUST00000179692 110 ntBASIC16.52■□□□□ 0.24
Cchcr1Q8K2I2 Gm25086-201ENSMUST00000179931 110 ntBASIC16.52■□□□□ 0.24
Cchcr1Q8K2I2 Gm23243-201ENSMUST00000180047 110 ntBASIC16.52■□□□□ 0.24
Cchcr1Q8K2I2 Gm24659-201ENSMUST00000180212 110 ntBASIC16.52■□□□□ 0.24
Cchcr1Q8K2I2 Gm24169-201ENSMUST00000180244 110 ntBASIC16.52■□□□□ 0.24
Cchcr1Q8K2I2 Gm23689-201ENSMUST00000180354 110 ntBASIC16.52■□□□□ 0.24
Cchcr1Q8K2I2 Gm3809-201ENSMUST00000180973 1006 ntBASIC16.52■□□□□ 0.24
Cchcr1Q8K2I2 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC16.52■□□□□ 0.24
Cchcr1Q8K2I2 Gm27359-201ENSMUST00000184153 110 ntBASIC16.52■□□□□ 0.24
Cchcr1Q8K2I2 Gm27785-201ENSMUST00000184268 110 ntBASIC16.52■□□□□ 0.24
Cchcr1Q8K2I2 Gm27466-201ENSMUST00000184396 110 ntBASIC16.52■□□□□ 0.24
Cchcr1Q8K2I2 Gm27703-201ENSMUST00000184836 110 ntBASIC16.52■□□□□ 0.24
Cchcr1Q8K2I2 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC16.52■□□□□ 0.24
Cchcr1Q8K2I2 Gm18027-201ENSMUST00000218947 619 ntBASIC16.52■□□□□ 0.24
Cchcr1Q8K2I2 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cchcr1Q8K2I2 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Cchcr1Q8K2I2 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Cchcr1Q8K2I2 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cchcr1Q8K2I2 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Cchcr1Q8K2I2 Gm5639-201ENSMUST00000122305 2403 ntBASIC16.52■□□□□ 0.24
Cchcr1Q8K2I2 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cchcr1Q8K2I2 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cchcr1Q8K2I2 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Cchcr1Q8K2I2 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cchcr1Q8K2I2 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Cchcr1Q8K2I2 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cchcr1Q8K2I2 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cchcr1Q8K2I2 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Cchcr1Q8K2I2 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cchcr1Q8K2I2 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Cchcr1Q8K2I2 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC16.52■□□□□ 0.23
Cchcr1Q8K2I2 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cchcr1Q8K2I2 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Cchcr1Q8K2I2 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cchcr1Q8K2I2 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cchcr1Q8K2I2 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cchcr1Q8K2I2 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cchcr1Q8K2I2 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cchcr1Q8K2I2 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC16.51■□□□□ 0.23
Cchcr1Q8K2I2 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cchcr1Q8K2I2 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Cchcr1Q8K2I2 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cchcr1Q8K2I2 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cchcr1Q8K2I2 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Cchcr1Q8K2I2 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cchcr1Q8K2I2 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cchcr1Q8K2I2 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC16.51■□□□□ 0.23
Cchcr1Q8K2I2 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC16.51■□□□□ 0.23
Cchcr1Q8K2I2 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC16.51■□□□□ 0.23
Cchcr1Q8K2I2 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cchcr1Q8K2I2 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cchcr1Q8K2I2 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cchcr1Q8K2I2 AC149294.4-201ENSMUST00000227870 882 ntBASIC16.51■□□□□ 0.23
Cchcr1Q8K2I2 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cchcr1Q8K2I2 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Cchcr1Q8K2I2 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC16.51■□□□□ 0.23
Cchcr1Q8K2I2 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cchcr1Q8K2I2 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cchcr1Q8K2I2 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 72.9 ms