Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Smc5Q8CG46 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smc5Q8CG46 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Smc5Q8CG46 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smc5Q8CG46 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
Smc5Q8CG46 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC17.26■□□□□ 0.35
Smc5Q8CG46 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Smc5Q8CG46 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smc5Q8CG46 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Smc5Q8CG46 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC17.26■□□□□ 0.35
Smc5Q8CG46 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smc5Q8CG46 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Smc5Q8CG46 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC17.26■□□□□ 0.35
Smc5Q8CG46 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Smc5Q8CG46 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC17.26■□□□□ 0.35
Smc5Q8CG46 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC17.26■□□□□ 0.35
Smc5Q8CG46 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC17.26■□□□□ 0.35
Smc5Q8CG46 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smc5Q8CG46 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Smc5Q8CG46 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smc5Q8CG46 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smc5Q8CG46 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smc5Q8CG46 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Smc5Q8CG46 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smc5Q8CG46 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smc5Q8CG46 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smc5Q8CG46 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smc5Q8CG46 Gm7899-201ENSMUST00000192935 1897 ntBASIC17.26■□□□□ 0.35
Smc5Q8CG46 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smc5Q8CG46 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smc5Q8CG46 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Smc5Q8CG46 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Smc5Q8CG46 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC17.26■□□□□ 0.35
Smc5Q8CG46 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Smc5Q8CG46 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smc5Q8CG46 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smc5Q8CG46 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smc5Q8CG46 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC17.25■□□□□ 0.35
Smc5Q8CG46 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Smc5Q8CG46 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smc5Q8CG46 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smc5Q8CG46 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC17.25■□□□□ 0.35
Smc5Q8CG46 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Smc5Q8CG46 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smc5Q8CG46 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC17.25■□□□□ 0.35
Smc5Q8CG46 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC17.25■□□□□ 0.35
Smc5Q8CG46 Gm12428-201ENSMUST00000119844 727 ntBASIC17.25■□□□□ 0.35
Smc5Q8CG46 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smc5Q8CG46 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Smc5Q8CG46 Rprl2-201ENSMUST00000157150 290 ntBASIC17.25■□□□□ 0.35
Smc5Q8CG46 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Smc5Q8CG46 Gm37714-201ENSMUST00000194742 342 ntBASIC17.25■□□□□ 0.35
Smc5Q8CG46 Gm6443-201ENSMUST00000203599 874 ntBASIC17.25■□□□□ 0.35
Smc5Q8CG46 AC133598.3-202ENSMUST00000224219 531 ntBASIC17.25■□□□□ 0.35
Smc5Q8CG46 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smc5Q8CG46 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smc5Q8CG46 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Smc5Q8CG46 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smc5Q8CG46 Gm13332-201ENSMUST00000120451 1398 ntBASIC17.25■□□□□ 0.35
Smc5Q8CG46 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC17.25■□□□□ 0.35
Smc5Q8CG46 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smc5Q8CG46 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Smc5Q8CG46 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smc5Q8CG46 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smc5Q8CG46 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smc5Q8CG46 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Smc5Q8CG46 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
Smc5Q8CG46 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smc5Q8CG46 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Smc5Q8CG46 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Smc5Q8CG46 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smc5Q8CG46 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smc5Q8CG46 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Smc5Q8CG46 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Smc5Q8CG46 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smc5Q8CG46 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
Smc5Q8CG46 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC17.24■□□□□ 0.35
Smc5Q8CG46 Gm25911-201ENSMUST00000157621 56 ntBASIC17.24■□□□□ 0.35
Smc5Q8CG46 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smc5Q8CG46 Gm44719-201ENSMUST00000206404 149 ntBASIC17.24■□□□□ 0.35
Smc5Q8CG46 AC149294.4-201ENSMUST00000227870 882 ntBASIC17.24■□□□□ 0.35
Smc5Q8CG46 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smc5Q8CG46 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Smc5Q8CG46 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smc5Q8CG46 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Smc5Q8CG46 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smc5Q8CG46 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smc5Q8CG46 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Smc5Q8CG46 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smc5Q8CG46 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
Smc5Q8CG46 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smc5Q8CG46 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Smc5Q8CG46 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Smc5Q8CG46 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Smc5Q8CG46 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Smc5Q8CG46 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smc5Q8CG46 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smc5Q8CG46 Gm44891-201ENSMUST00000208817 2223 ntBASIC17.23■□□□□ 0.35
Smc5Q8CG46 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smc5Q8CG46 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms