Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim52Q8CDV4 Gm37424-201ENSMUST00000191727 561 ntBASIC17.13■□□□□ 0.33
Trim52Q8CDV4 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim52Q8CDV4 Gm9299-201ENSMUST00000206392 1140 ntBASIC17.13■□□□□ 0.33
Trim52Q8CDV4 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim52Q8CDV4 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim52Q8CDV4 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim52Q8CDV4 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim52Q8CDV4 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim52Q8CDV4 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim52Q8CDV4 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim52Q8CDV4 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Trim52Q8CDV4 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim52Q8CDV4 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim52Q8CDV4 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim52Q8CDV4 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim52Q8CDV4 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim52Q8CDV4 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim52Q8CDV4 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim52Q8CDV4 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim52Q8CDV4 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim52Q8CDV4 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Trim52Q8CDV4 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trim52Q8CDV4 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trim52Q8CDV4 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trim52Q8CDV4 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim52Q8CDV4 Gm8213-201ENSMUST00000118191 441 ntBASIC17.12■□□□□ 0.33
Trim52Q8CDV4 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Trim52Q8CDV4 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Trim52Q8CDV4 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Trim52Q8CDV4 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Trim52Q8CDV4 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC17.12■□□□□ 0.33
Trim52Q8CDV4 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim52Q8CDV4 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim52Q8CDV4 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trim52Q8CDV4 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim52Q8CDV4 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim52Q8CDV4 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC17.12■□□□□ 0.33
Trim52Q8CDV4 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Trim52Q8CDV4 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim52Q8CDV4 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim52Q8CDV4 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim52Q8CDV4 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trim52Q8CDV4 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim52Q8CDV4 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim52Q8CDV4 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim52Q8CDV4 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Trim52Q8CDV4 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim52Q8CDV4 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC17.11■□□□□ 0.33
Trim52Q8CDV4 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Trim52Q8CDV4 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim52Q8CDV4 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC17.11■□□□□ 0.33
Trim52Q8CDV4 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Trim52Q8CDV4 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim52Q8CDV4 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim52Q8CDV4 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trim52Q8CDV4 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Trim52Q8CDV4 Gm22331-201ENSMUST00000158066 136 ntBASIC17.11■□□□□ 0.33
Trim52Q8CDV4 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim52Q8CDV4 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC17.11■□□□□ 0.33
Trim52Q8CDV4 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim52Q8CDV4 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
Trim52Q8CDV4 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim52Q8CDV4 Rn7sk-201ENSMUST00000083103 331 ntBASIC17.11■□□□□ 0.33
Trim52Q8CDV4 Gm26315-201ENSMUST00000083890 321 ntBASIC17.11■□□□□ 0.33
Trim52Q8CDV4 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim52Q8CDV4 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim52Q8CDV4 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim52Q8CDV4 Gm9755-201ENSMUST00000032981 1356 ntBASIC17.11■□□□□ 0.33
Trim52Q8CDV4 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim52Q8CDV4 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC17.11■□□□□ 0.33
Trim52Q8CDV4 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Trim52Q8CDV4 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim52Q8CDV4 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trim52Q8CDV4 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Trim52Q8CDV4 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim52Q8CDV4 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trim52Q8CDV4 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim52Q8CDV4 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim52Q8CDV4 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim52Q8CDV4 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC17.1■□□□□ 0.33
Trim52Q8CDV4 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim52Q8CDV4 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim52Q8CDV4 Gm13392-201ENSMUST00000117708 150 ntBASIC17.1■□□□□ 0.33
Trim52Q8CDV4 Gm13886-201ENSMUST00000117876 1183 ntBASIC17.1■□□□□ 0.33
Trim52Q8CDV4 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC17.1■□□□□ 0.33
Trim52Q8CDV4 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC17.1■□□□□ 0.33
Trim52Q8CDV4 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC17.1■□□□□ 0.33
Trim52Q8CDV4 Itm2b-204ENSMUST00000228637 783 ntBASIC17.1■□□□□ 0.33
Trim52Q8CDV4 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trim52Q8CDV4 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC17.1■□□□□ 0.33
Trim52Q8CDV4 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim52Q8CDV4 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Trim52Q8CDV4 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim52Q8CDV4 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim52Q8CDV4 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim52Q8CDV4 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC17.1■□□□□ 0.33
Trim52Q8CDV4 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Trim52Q8CDV4 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trim52Q8CDV4 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms