Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Prpf31Q8CCF0 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Prpf31Q8CCF0 Gm6180-201ENSMUST00000065243 498 ntBASIC15.27■□□□□ 0.04
Prpf31Q8CCF0 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Prpf31Q8CCF0 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Prpf31Q8CCF0 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Prpf31Q8CCF0 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC15.27■□□□□ 0.03
Prpf31Q8CCF0 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Prpf31Q8CCF0 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Prpf31Q8CCF0 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Prpf31Q8CCF0 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Prpf31Q8CCF0 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Prpf31Q8CCF0 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Prpf31Q8CCF0 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf31Q8CCF0 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Prpf31Q8CCF0 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf31Q8CCF0 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf31Q8CCF0 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf31Q8CCF0 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf31Q8CCF0 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf31Q8CCF0 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf31Q8CCF0 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf31Q8CCF0 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf31Q8CCF0 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf31Q8CCF0 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf31Q8CCF0 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf31Q8CCF0 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Prpf31Q8CCF0 AC159196.2-201ENSMUST00000224082 1622 ntBASIC15.26■□□□□ 0.03
Prpf31Q8CCF0 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf31Q8CCF0 Mmp14-206ENSMUST00000225641 3238 ntBASIC15.26■□□□□ 0.03
Prpf31Q8CCF0 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Prpf31Q8CCF0 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC15.26■□□□□ 0.03
Prpf31Q8CCF0 Gm6912-201ENSMUST00000117218 544 ntBASIC15.26■□□□□ 0.03
Prpf31Q8CCF0 Gm11557-201ENSMUST00000120200 1008 ntBASIC15.26■□□□□ 0.03
Prpf31Q8CCF0 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC15.26■□□□□ 0.03
Prpf31Q8CCF0 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf31Q8CCF0 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC15.26■□□□□ 0.03
Prpf31Q8CCF0 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf31Q8CCF0 Gm8927-201ENSMUST00000181978 981 ntBASIC15.26■□□□□ 0.03
Prpf31Q8CCF0 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC15.26■□□□□ 0.03
Prpf31Q8CCF0 Gm18018-201ENSMUST00000198273 408 ntBASIC15.26■□□□□ 0.03
Prpf31Q8CCF0 AC131690.1-201ENSMUST00000218406 374 ntBASIC15.26■□□□□ 0.03
Prpf31Q8CCF0 AC154687.2-201ENSMUST00000223853 640 ntBASIC15.26■□□□□ 0.03
Prpf31Q8CCF0 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf31Q8CCF0 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf31Q8CCF0 Gm3222-201ENSMUST00000071282 990 ntBASIC15.26■□□□□ 0.03
Prpf31Q8CCF0 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Prpf31Q8CCF0 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Prpf31Q8CCF0 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf31Q8CCF0 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf31Q8CCF0 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Prpf31Q8CCF0 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf31Q8CCF0 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf31Q8CCF0 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf31Q8CCF0 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf31Q8CCF0 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf31Q8CCF0 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf31Q8CCF0 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf31Q8CCF0 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf31Q8CCF0 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf31Q8CCF0 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC15.26■□□□□ 0.03
Prpf31Q8CCF0 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Prpf31Q8CCF0 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf31Q8CCF0 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf31Q8CCF0 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Prpf31Q8CCF0 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Prpf31Q8CCF0 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Prpf31Q8CCF0 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Prpf31Q8CCF0 Gm38102-201ENSMUST00000192791 1935 ntBASIC15.25■□□□□ 0.03
Prpf31Q8CCF0 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Prpf31Q8CCF0 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Prpf31Q8CCF0 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Prpf31Q8CCF0 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Prpf31Q8CCF0 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC15.25■□□□□ 0.03
Prpf31Q8CCF0 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Prpf31Q8CCF0 Gm12490-201ENSMUST00000120255 560 ntBASIC15.25■□□□□ 0.03
Prpf31Q8CCF0 Gm13385-201ENSMUST00000121089 220 ntBASIC15.25■□□□□ 0.03
Prpf31Q8CCF0 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC15.25■□□□□ 0.03
Prpf31Q8CCF0 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC15.25■□□□□ 0.03
Prpf31Q8CCF0 Gm5354-201ENSMUST00000182417 973 ntBASIC15.25■□□□□ 0.03
Prpf31Q8CCF0 Mir6392-201ENSMUST00000184924 108 ntBASIC15.25■□□□□ 0.03
Prpf31Q8CCF0 Ighv1-51-201ENSMUST00000192903 354 ntBASIC15.25■□□□□ 0.03
Prpf31Q8CCF0 Gm6745-201ENSMUST00000199216 526 ntBASIC15.25■□□□□ 0.03
Prpf31Q8CCF0 Gm18624-201ENSMUST00000220966 658 ntBASIC15.25■□□□□ 0.03
Prpf31Q8CCF0 Gm19220-201ENSMUST00000222682 803 ntBASIC15.25■□□□□ 0.03
Prpf31Q8CCF0 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC15.25■□□□□ 0.03
Prpf31Q8CCF0 CT030704.2-201ENSMUST00000228887 494 ntBASIC15.25■□□□□ 0.03
Prpf31Q8CCF0 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Prpf31Q8CCF0 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Prpf31Q8CCF0 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Prpf31Q8CCF0 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Prpf31Q8CCF0 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Prpf31Q8CCF0 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Prpf31Q8CCF0 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Prpf31Q8CCF0 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Prpf31Q8CCF0 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Prpf31Q8CCF0 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC15.25■□□□□ 0.03
Prpf31Q8CCF0 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Prpf31Q8CCF0 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Prpf31Q8CCF0 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms