Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim9Q8C7M3 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Trim9Q8C7M3 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trim9Q8C7M3 Gm17837-201ENSMUST00000186435 985 ntBASIC15.41■□□□□ 0.06
Trim9Q8C7M3 Ighv1-51-201ENSMUST00000192903 354 ntBASIC15.41■□□□□ 0.06
Trim9Q8C7M3 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trim9Q8C7M3 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC15.41■□□□□ 0.06
Trim9Q8C7M3 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trim9Q8C7M3 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC15.41■□□□□ 0.06
Trim9Q8C7M3 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim9Q8C7M3 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim9Q8C7M3 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim9Q8C7M3 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Trim9Q8C7M3 Il17rd-203ENSMUST00000225146 3366 ntBASIC15.41■□□□□ 0.06
Trim9Q8C7M3 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim9Q8C7M3 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trim9Q8C7M3 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim9Q8C7M3 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trim9Q8C7M3 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim9Q8C7M3 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim9Q8C7M3 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim9Q8C7M3 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim9Q8C7M3 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim9Q8C7M3 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trim9Q8C7M3 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim9Q8C7M3 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Trim9Q8C7M3 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trim9Q8C7M3 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim9Q8C7M3 Cd63-ps-201ENSMUST00000145417 875 ntBASIC15.4■□□□□ 0.06
Trim9Q8C7M3 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Trim9Q8C7M3 Gm3436-201ENSMUST00000179930 840 ntBASIC15.4■□□□□ 0.06
Trim9Q8C7M3 AC126408.1-201ENSMUST00000225184 523 ntBASIC15.4■□□□□ 0.06
Trim9Q8C7M3 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC15.4■□□□□ 0.06
Trim9Q8C7M3 Gm37133-201ENSMUST00000192705 1922 ntBASIC15.4■□□□□ 0.06
Trim9Q8C7M3 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim9Q8C7M3 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trim9Q8C7M3 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim9Q8C7M3 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim9Q8C7M3 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim9Q8C7M3 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim9Q8C7M3 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Trim9Q8C7M3 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
Trim9Q8C7M3 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim9Q8C7M3 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC15.39■□□□□ 0.06
Trim9Q8C7M3 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim9Q8C7M3 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim9Q8C7M3 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trim9Q8C7M3 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim9Q8C7M3 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim9Q8C7M3 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim9Q8C7M3 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trim9Q8C7M3 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim9Q8C7M3 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
Trim9Q8C7M3 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim9Q8C7M3 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC15.39■□□□□ 0.05
Trim9Q8C7M3 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim9Q8C7M3 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
Trim9Q8C7M3 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trim9Q8C7M3 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC15.39■□□□□ 0.05
Trim9Q8C7M3 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC15.39■□□□□ 0.05
Trim9Q8C7M3 Gm4971-201ENSMUST00000205991 1108 ntBASIC15.39■□□□□ 0.05
Trim9Q8C7M3 Gm7775-201ENSMUST00000218871 853 ntBASIC15.39■□□□□ 0.05
Trim9Q8C7M3 Gm9063-201ENSMUST00000223299 582 ntBASIC15.39■□□□□ 0.05
Trim9Q8C7M3 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim9Q8C7M3 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trim9Q8C7M3 Gm11405-201ENSMUST00000118689 1556 ntBASIC15.39■□□□□ 0.05
Trim9Q8C7M3 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim9Q8C7M3 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim9Q8C7M3 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC15.39■□□□□ 0.05
Trim9Q8C7M3 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim9Q8C7M3 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim9Q8C7M3 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim9Q8C7M3 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim9Q8C7M3 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim9Q8C7M3 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim9Q8C7M3 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim9Q8C7M3 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim9Q8C7M3 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim9Q8C7M3 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim9Q8C7M3 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trim9Q8C7M3 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trim9Q8C7M3 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim9Q8C7M3 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim9Q8C7M3 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim9Q8C7M3 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Trim9Q8C7M3 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim9Q8C7M3 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim9Q8C7M3 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim9Q8C7M3 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim9Q8C7M3 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim9Q8C7M3 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Trim9Q8C7M3 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Trim9Q8C7M3 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trim9Q8C7M3 Gm15393-201ENSMUST00000120499 219 ntBASIC15.38■□□□□ 0.05
Trim9Q8C7M3 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
Trim9Q8C7M3 Gm6283-201ENSMUST00000182369 1000 ntBASIC15.38■□□□□ 0.05
Trim9Q8C7M3 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim9Q8C7M3 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim9Q8C7M3 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trim9Q8C7M3 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms