Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 n-R5s14-201ENSMUST00000122688 107 ntBASIC13.13□□□□□ -0.31
Cfap54Q8C6S9 Gm22334-201ENSMUST00000158070 133 ntBASIC13.13□□□□□ -0.31
Cfap54Q8C6S9 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC13.13□□□□□ -0.31
Cfap54Q8C6S9 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cfap54Q8C6S9 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cfap54Q8C6S9 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cfap54Q8C6S9 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cfap54Q8C6S9 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cfap54Q8C6S9 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cfap54Q8C6S9 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cfap54Q8C6S9 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
Cfap54Q8C6S9 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cfap54Q8C6S9 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Cfap54Q8C6S9 Camk2g-217ENSMUST00000226630 1937 ntBASIC13.13□□□□□ -0.31
Cfap54Q8C6S9 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cfap54Q8C6S9 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Cfap54Q8C6S9 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cfap54Q8C6S9 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cfap54Q8C6S9 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cfap54Q8C6S9 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cfap54Q8C6S9 Ighv1-51-201ENSMUST00000192903 354 ntBASIC13.13□□□□□ -0.31
Cfap54Q8C6S9 Morn2-202ENSMUST00000227729 656 ntBASIC13.13□□□□□ -0.31
Cfap54Q8C6S9 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cfap54Q8C6S9 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cfap54Q8C6S9 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cfap54Q8C6S9 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Cfap54Q8C6S9 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cfap54Q8C6S9 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cfap54Q8C6S9 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cfap54Q8C6S9 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC13.13□□□□□ -0.31
Cfap54Q8C6S9 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.13□□□□□ -0.31
Cfap54Q8C6S9 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC13.13□□□□□ -0.31
Cfap54Q8C6S9 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cfap54Q8C6S9 AC073947.2-201ENSMUST00000215888 1130 ntBASIC13.13□□□□□ -0.31
Cfap54Q8C6S9 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC13.13□□□□□ -0.31
Cfap54Q8C6S9 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cfap54Q8C6S9 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cfap54Q8C6S9 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cfap54Q8C6S9 Matn2-206ENSMUST00000228570 2798 ntBASIC13.12□□□□□ -0.31
Cfap54Q8C6S9 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cfap54Q8C6S9 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.12□□□□□ -0.31
Cfap54Q8C6S9 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cfap54Q8C6S9 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cfap54Q8C6S9 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cfap54Q8C6S9 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cfap54Q8C6S9 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cfap54Q8C6S9 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Cfap54Q8C6S9 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cfap54Q8C6S9 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Cfap54Q8C6S9 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC13.12□□□□□ -0.31
Cfap54Q8C6S9 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC13.12□□□□□ -0.31
Cfap54Q8C6S9 Mir433-201ENSMUST00000093564 124 ntBASIC13.12□□□□□ -0.31
Cfap54Q8C6S9 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cfap54Q8C6S9 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cfap54Q8C6S9 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cfap54Q8C6S9 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Cfap54Q8C6S9 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cfap54Q8C6S9 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC13.12□□□□□ -0.31
Cfap54Q8C6S9 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC13.12□□□□□ -0.31
Cfap54Q8C6S9 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cfap54Q8C6S9 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cfap54Q8C6S9 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.12□□□□□ -0.31
Cfap54Q8C6S9 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cfap54Q8C6S9 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cfap54Q8C6S9 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cfap54Q8C6S9 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.12□□□□□ -0.31
Cfap54Q8C6S9 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cfap54Q8C6S9 Gm45684-201ENSMUST00000210244 1571 ntBASIC13.12□□□□□ -0.31
Cfap54Q8C6S9 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cfap54Q8C6S9 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cfap54Q8C6S9 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cfap54Q8C6S9 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC13.11□□□□□ -0.31
Cfap54Q8C6S9 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC13.11□□□□□ -0.31
Cfap54Q8C6S9 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC13.11□□□□□ -0.31
Cfap54Q8C6S9 Mir5120-201ENSMUST00000175020 78 ntBASIC13.11□□□□□ -0.31
Cfap54Q8C6S9 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Cfap54Q8C6S9 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cfap54Q8C6S9 AC122371.3-201ENSMUST00000223402 1061 ntBASIC13.11□□□□□ -0.31
Cfap54Q8C6S9 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cfap54Q8C6S9 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cfap54Q8C6S9 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cfap54Q8C6S9 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cfap54Q8C6S9 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Cfap54Q8C6S9 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cfap54Q8C6S9 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.11□□□□□ -0.31
Cfap54Q8C6S9 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cfap54Q8C6S9 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC13.11□□□□□ -0.31
Cfap54Q8C6S9 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cfap54Q8C6S9 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cfap54Q8C6S9 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cfap54Q8C6S9 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cfap54Q8C6S9 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cfap54Q8C6S9 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC13.11□□□□□ -0.31
Cfap54Q8C6S9 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.11□□□□□ -0.31
Cfap54Q8C6S9 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cfap54Q8C6S9 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cfap54Q8C6S9 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cfap54Q8C6S9 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.11□□□□□ -0.31
Cfap54Q8C6S9 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cfap54Q8C6S9 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms