Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
Col6a6Q8C6K9 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col6a6Q8C6K9 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Col6a6Q8C6K9 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col6a6Q8C6K9 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
Col6a6Q8C6K9 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col6a6Q8C6K9 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col6a6Q8C6K9 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col6a6Q8C6K9 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col6a6Q8C6K9 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col6a6Q8C6K9 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
Col6a6Q8C6K9 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col6a6Q8C6K9 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Col6a6Q8C6K9 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Col6a6Q8C6K9 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col6a6Q8C6K9 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col6a6Q8C6K9 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col6a6Q8C6K9 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Col6a6Q8C6K9 Gm8213-201ENSMUST00000118191 441 ntBASIC12.57□□□□□ -0.4
Col6a6Q8C6K9 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Col6a6Q8C6K9 Gm7584-201ENSMUST00000175829 940 ntBASIC12.57□□□□□ -0.4
Col6a6Q8C6K9 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC12.57□□□□□ -0.4
Col6a6Q8C6K9 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col6a6Q8C6K9 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col6a6Q8C6K9 Gm17383-201ENSMUST00000078739 1041 ntBASIC12.57□□□□□ -0.4
Col6a6Q8C6K9 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC12.57□□□□□ -0.4
Col6a6Q8C6K9 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Col6a6Q8C6K9 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col6a6Q8C6K9 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col6a6Q8C6K9 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Col6a6Q8C6K9 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col6a6Q8C6K9 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Col6a6Q8C6K9 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col6a6Q8C6K9 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Col6a6Q8C6K9 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col6a6Q8C6K9 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col6a6Q8C6K9 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Col6a6Q8C6K9 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col6a6Q8C6K9 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col6a6Q8C6K9 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col6a6Q8C6K9 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col6a6Q8C6K9 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col6a6Q8C6K9 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Col6a6Q8C6K9 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col6a6Q8C6K9 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Col6a6Q8C6K9 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.56□□□□□ -0.4
Col6a6Q8C6K9 Gm27682-201ENSMUST00000183930 110 ntBASIC12.56□□□□□ -0.4
Col6a6Q8C6K9 Gm38002-201ENSMUST00000193255 180 ntBASIC12.56□□□□□ -0.4
Col6a6Q8C6K9 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC12.56□□□□□ -0.4
Col6a6Q8C6K9 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC12.56□□□□□ -0.4
Col6a6Q8C6K9 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Col6a6Q8C6K9 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Col6a6Q8C6K9 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col6a6Q8C6K9 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col6a6Q8C6K9 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col6a6Q8C6K9 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Col6a6Q8C6K9 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col6a6Q8C6K9 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Col6a6Q8C6K9 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col6a6Q8C6K9 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col6a6Q8C6K9 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col6a6Q8C6K9 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Col6a6Q8C6K9 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Col6a6Q8C6K9 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.55□□□□□ -0.4
Col6a6Q8C6K9 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Col6a6Q8C6K9 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col6a6Q8C6K9 Gm38671-201ENSMUST00000200573 130 ntBASIC12.55□□□□□ -0.4
Col6a6Q8C6K9 Gm6013-201ENSMUST00000212264 699 ntBASIC12.55□□□□□ -0.4
Col6a6Q8C6K9 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.55□□□□□ -0.4
Col6a6Q8C6K9 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col6a6Q8C6K9 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col6a6Q8C6K9 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col6a6Q8C6K9 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC12.55□□□□□ -0.4
Col6a6Q8C6K9 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col6a6Q8C6K9 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col6a6Q8C6K9 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col6a6Q8C6K9 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Col6a6Q8C6K9 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Col6a6Q8C6K9 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col6a6Q8C6K9 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col6a6Q8C6K9 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col6a6Q8C6K9 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col6a6Q8C6K9 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col6a6Q8C6K9 Gm16177-201ENSMUST00000120728 718 ntBASIC12.55□□□□□ -0.4
Col6a6Q8C6K9 Gm16570-201ENSMUST00000161951 436 ntBASIC12.55□□□□□ -0.4
Col6a6Q8C6K9 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Col6a6Q8C6K9 Gm27331-201ENSMUST00000183705 60 ntBASIC12.55□□□□□ -0.4
Col6a6Q8C6K9 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.55□□□□□ -0.4
Col6a6Q8C6K9 Gm44397-201ENSMUST00000195950 113 ntBASIC12.55□□□□□ -0.4
Col6a6Q8C6K9 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col6a6Q8C6K9 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Col6a6Q8C6K9 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col6a6Q8C6K9 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col6a6Q8C6K9 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col6a6Q8C6K9 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col6a6Q8C6K9 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col6a6Q8C6K9 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col6a6Q8C6K9 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.54□□□□□ -0.4
Col6a6Q8C6K9 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col6a6Q8C6K9 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms