Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Gm15957-201ENSMUST00000118893 974 ntBASIC17.15■□□□□ 0.34
Ptcd1Q8C2E4 Gm12882-201ENSMUST00000121696 517 ntBASIC17.15■□□□□ 0.34
Ptcd1Q8C2E4 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC17.15■□□□□ 0.34
Ptcd1Q8C2E4 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ptcd1Q8C2E4 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC17.15■□□□□ 0.34
Ptcd1Q8C2E4 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ptcd1Q8C2E4 Gm5370-201ENSMUST00000187187 574 ntBASIC17.15■□□□□ 0.34
Ptcd1Q8C2E4 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC17.15■□□□□ 0.34
Ptcd1Q8C2E4 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC17.15■□□□□ 0.34
Ptcd1Q8C2E4 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ptcd1Q8C2E4 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ptcd1Q8C2E4 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Ptcd1Q8C2E4 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ptcd1Q8C2E4 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ptcd1Q8C2E4 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ptcd1Q8C2E4 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ptcd1Q8C2E4 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ptcd1Q8C2E4 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ptcd1Q8C2E4 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ptcd1Q8C2E4 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ptcd1Q8C2E4 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ptcd1Q8C2E4 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ptcd1Q8C2E4 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ptcd1Q8C2E4 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Ptcd1Q8C2E4 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC17.14■□□□□ 0.34
Ptcd1Q8C2E4 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC17.14■□□□□ 0.34
Ptcd1Q8C2E4 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Ptcd1Q8C2E4 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ptcd1Q8C2E4 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ptcd1Q8C2E4 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ptcd1Q8C2E4 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ptcd1Q8C2E4 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ptcd1Q8C2E4 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ptcd1Q8C2E4 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ptcd1Q8C2E4 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ptcd1Q8C2E4 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ptcd1Q8C2E4 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ptcd1Q8C2E4 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ptcd1Q8C2E4 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ptcd1Q8C2E4 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ptcd1Q8C2E4 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC17.14■□□□□ 0.33
Ptcd1Q8C2E4 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ptcd1Q8C2E4 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC17.14■□□□□ 0.33
Ptcd1Q8C2E4 Gm12384-201ENSMUST00000119228 919 ntBASIC17.14■□□□□ 0.33
Ptcd1Q8C2E4 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ptcd1Q8C2E4 Gm18827-201ENSMUST00000188341 790 ntBASIC17.14■□□□□ 0.33
Ptcd1Q8C2E4 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Ptcd1Q8C2E4 Gm42442-201ENSMUST00000197951 1133 ntBASIC17.14■□□□□ 0.33
Ptcd1Q8C2E4 Gm19078-201ENSMUST00000206311 727 ntBASIC17.14■□□□□ 0.33
Ptcd1Q8C2E4 Gm40466-201ENSMUST00000212174 422 ntBASIC17.14■□□□□ 0.33
Ptcd1Q8C2E4 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ptcd1Q8C2E4 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC17.14■□□□□ 0.33
Ptcd1Q8C2E4 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ptcd1Q8C2E4 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ptcd1Q8C2E4 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ptcd1Q8C2E4 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC17.14■□□□□ 0.33
Ptcd1Q8C2E4 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC17.14■□□□□ 0.33
Ptcd1Q8C2E4 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Ptcd1Q8C2E4 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ptcd1Q8C2E4 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ptcd1Q8C2E4 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ptcd1Q8C2E4 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC17.14■□□□□ 0.33
Ptcd1Q8C2E4 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ptcd1Q8C2E4 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ptcd1Q8C2E4 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC17.14■□□□□ 0.33
Ptcd1Q8C2E4 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Ptcd1Q8C2E4 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Ptcd1Q8C2E4 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ptcd1Q8C2E4 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Ptcd1Q8C2E4 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ptcd1Q8C2E4 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Ptcd1Q8C2E4 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ptcd1Q8C2E4 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ptcd1Q8C2E4 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ptcd1Q8C2E4 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ptcd1Q8C2E4 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ptcd1Q8C2E4 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ptcd1Q8C2E4 Dctn4-202ENSMUST00000223590 1530 ntBASIC17.13■□□□□ 0.33
Ptcd1Q8C2E4 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ptcd1Q8C2E4 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ptcd1Q8C2E4 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ptcd1Q8C2E4 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ptcd1Q8C2E4 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ptcd1Q8C2E4 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC17.13■□□□□ 0.33
Ptcd1Q8C2E4 Gm15240-201ENSMUST00000118156 720 ntBASIC17.13■□□□□ 0.33
Ptcd1Q8C2E4 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC17.13■□□□□ 0.33
Ptcd1Q8C2E4 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC17.13■□□□□ 0.33
Ptcd1Q8C2E4 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ptcd1Q8C2E4 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ptcd1Q8C2E4 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ptcd1Q8C2E4 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ptcd1Q8C2E4 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ptcd1Q8C2E4 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ptcd1Q8C2E4 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ptcd1Q8C2E4 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Ptcd1Q8C2E4 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Ptcd1Q8C2E4 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ptcd1Q8C2E4 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ptcd1Q8C2E4 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ptcd1Q8C2E4 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms