Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sh3rf3Q8C120 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Sh3rf3Q8C120 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sh3rf3Q8C120 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sh3rf3Q8C120 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
Sh3rf3Q8C120 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Sh3rf3Q8C120 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sh3rf3Q8C120 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC14.58□□□□□ -0.08
Sh3rf3Q8C120 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC14.58□□□□□ -0.08
Sh3rf3Q8C120 Gm6916-202ENSMUST00000205523 195 ntBASIC14.58□□□□□ -0.08
Sh3rf3Q8C120 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC14.58□□□□□ -0.08
Sh3rf3Q8C120 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sh3rf3Q8C120 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sh3rf3Q8C120 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Sh3rf3Q8C120 Gm42928-201ENSMUST00000197338 3339 ntBASIC14.58□□□□□ -0.08
Sh3rf3Q8C120 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sh3rf3Q8C120 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Sh3rf3Q8C120 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sh3rf3Q8C120 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Sh3rf3Q8C120 Gm2420-202ENSMUST00000202224 2249 ntBASIC14.58□□□□□ -0.08
Sh3rf3Q8C120 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sh3rf3Q8C120 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Sh3rf3Q8C120 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sh3rf3Q8C120 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sh3rf3Q8C120 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.58□□□□□ -0.08
Sh3rf3Q8C120 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC14.58□□□□□ -0.08
Sh3rf3Q8C120 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sh3rf3Q8C120 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sh3rf3Q8C120 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sh3rf3Q8C120 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.57□□□□□ -0.08
Sh3rf3Q8C120 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Sh3rf3Q8C120 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC14.57□□□□□ -0.08
Sh3rf3Q8C120 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sh3rf3Q8C120 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sh3rf3Q8C120 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sh3rf3Q8C120 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Sh3rf3Q8C120 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sh3rf3Q8C120 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sh3rf3Q8C120 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sh3rf3Q8C120 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sh3rf3Q8C120 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sh3rf3Q8C120 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Sh3rf3Q8C120 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Sh3rf3Q8C120 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Sh3rf3Q8C120 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Sh3rf3Q8C120 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Sh3rf3Q8C120 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sh3rf3Q8C120 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sh3rf3Q8C120 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sh3rf3Q8C120 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sh3rf3Q8C120 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Sh3rf3Q8C120 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sh3rf3Q8C120 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sh3rf3Q8C120 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sh3rf3Q8C120 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sh3rf3Q8C120 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sh3rf3Q8C120 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sh3rf3Q8C120 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sh3rf3Q8C120 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sh3rf3Q8C120 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sh3rf3Q8C120 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sh3rf3Q8C120 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sh3rf3Q8C120 Gm9947-201ENSMUST00000067599 2920 ntBASIC14.56□□□□□ -0.08
Sh3rf3Q8C120 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sh3rf3Q8C120 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sh3rf3Q8C120 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sh3rf3Q8C120 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sh3rf3Q8C120 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sh3rf3Q8C120 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sh3rf3Q8C120 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Sh3rf3Q8C120 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sh3rf3Q8C120 AA543401-201ENSMUST00000164248 1269 ntBASIC14.56□□□□□ -0.08
Sh3rf3Q8C120 Ighv8-14-201ENSMUST00000196781 358 ntBASIC14.56□□□□□ -0.08
Sh3rf3Q8C120 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sh3rf3Q8C120 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sh3rf3Q8C120 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Sh3rf3Q8C120 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Sh3rf3Q8C120 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sh3rf3Q8C120 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sh3rf3Q8C120 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sh3rf3Q8C120 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sh3rf3Q8C120 Gm12500-202ENSMUST00000186471 2428 ntBASIC14.56□□□□□ -0.08
Sh3rf3Q8C120 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sh3rf3Q8C120 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC14.56□□□□□ -0.08
Sh3rf3Q8C120 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sh3rf3Q8C120 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sh3rf3Q8C120 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sh3rf3Q8C120 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC14.56□□□□□ -0.08
Sh3rf3Q8C120 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC14.56□□□□□ -0.08
Sh3rf3Q8C120 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sh3rf3Q8C120 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sh3rf3Q8C120 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sh3rf3Q8C120 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC14.55□□□□□ -0.08
Sh3rf3Q8C120 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sh3rf3Q8C120 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sh3rf3Q8C120 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sh3rf3Q8C120 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Sh3rf3Q8C120 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sh3rf3Q8C120 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sh3rf3Q8C120 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms