Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Usp43Q8BUM9 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp43Q8BUM9 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp43Q8BUM9 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp43Q8BUM9 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Usp43Q8BUM9 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Usp43Q8BUM9 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.15
Usp43Q8BUM9 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Usp43Q8BUM9 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp43Q8BUM9 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp43Q8BUM9 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp43Q8BUM9 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp43Q8BUM9 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Usp43Q8BUM9 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Usp43Q8BUM9 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp43Q8BUM9 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp43Q8BUM9 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp43Q8BUM9 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC14.14□□□□□ -0.15
Usp43Q8BUM9 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Usp43Q8BUM9 Gm15393-201ENSMUST00000120499 219 ntBASIC14.14□□□□□ -0.15
Usp43Q8BUM9 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC14.14□□□□□ -0.15
Usp43Q8BUM9 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp43Q8BUM9 Mir6956-201ENSMUST00000183598 62 ntBASIC14.14□□□□□ -0.15
Usp43Q8BUM9 Ighv1-51-201ENSMUST00000192903 354 ntBASIC14.14□□□□□ -0.15
Usp43Q8BUM9 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC14.14□□□□□ -0.15
Usp43Q8BUM9 Gm7775-201ENSMUST00000218871 853 ntBASIC14.14□□□□□ -0.15
Usp43Q8BUM9 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC14.14□□□□□ -0.15
Usp43Q8BUM9 Gm9063-201ENSMUST00000223299 582 ntBASIC14.14□□□□□ -0.15
Usp43Q8BUM9 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Usp43Q8BUM9 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Usp43Q8BUM9 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp43Q8BUM9 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp43Q8BUM9 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp43Q8BUM9 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Usp43Q8BUM9 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Usp43Q8BUM9 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp43Q8BUM9 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.14□□□□□ -0.15
Usp43Q8BUM9 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp43Q8BUM9 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp43Q8BUM9 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Usp43Q8BUM9 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Usp43Q8BUM9 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp43Q8BUM9 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Usp43Q8BUM9 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Usp43Q8BUM9 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp43Q8BUM9 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp43Q8BUM9 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp43Q8BUM9 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp43Q8BUM9 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Usp43Q8BUM9 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Usp43Q8BUM9 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp43Q8BUM9 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Usp43Q8BUM9 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp43Q8BUM9 Zkscan14-203ENSMUST00000198959 2243 ntBASIC14.13□□□□□ -0.15
Usp43Q8BUM9 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp43Q8BUM9 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp43Q8BUM9 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Usp43Q8BUM9 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp43Q8BUM9 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp43Q8BUM9 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp43Q8BUM9 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Usp43Q8BUM9 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Usp43Q8BUM9 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC14.13□□□□□ -0.15
Usp43Q8BUM9 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Usp43Q8BUM9 Gm6283-201ENSMUST00000182369 1000 ntBASIC14.13□□□□□ -0.15
Usp43Q8BUM9 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC14.13□□□□□ -0.15
Usp43Q8BUM9 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp43Q8BUM9 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp43Q8BUM9 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp43Q8BUM9 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp43Q8BUM9 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC14.13□□□□□ -0.15
Usp43Q8BUM9 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp43Q8BUM9 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp43Q8BUM9 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC14.13□□□□□ -0.15
Usp43Q8BUM9 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp43Q8BUM9 Gm42769-201ENSMUST00000198576 1659 ntBASIC14.13□□□□□ -0.15
Usp43Q8BUM9 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.13□□□□□ -0.15
Usp43Q8BUM9 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Usp43Q8BUM9 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp43Q8BUM9 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp43Q8BUM9 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Usp43Q8BUM9 AC159621.2-201ENSMUST00000223519 1326 ntBASIC14.13□□□□□ -0.15
Usp43Q8BUM9 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp43Q8BUM9 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.13□□□□□ -0.15
Usp43Q8BUM9 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC14.12□□□□□ -0.15
Usp43Q8BUM9 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp43Q8BUM9 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Usp43Q8BUM9 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
Usp43Q8BUM9 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Usp43Q8BUM9 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp43Q8BUM9 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.12□□□□□ -0.15
Usp43Q8BUM9 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC14.12□□□□□ -0.15
Usp43Q8BUM9 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp43Q8BUM9 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.12□□□□□ -0.15
Usp43Q8BUM9 Gm12585-201ENSMUST00000117307 290 ntBASIC14.12□□□□□ -0.15
Usp43Q8BUM9 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
Usp43Q8BUM9 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Usp43Q8BUM9 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Usp43Q8BUM9 Gm27306-201ENSMUST00000183970 107 ntBASIC14.12□□□□□ -0.15
Usp43Q8BUM9 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms