Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Nup54Q8BTS4 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nup54Q8BTS4 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nup54Q8BTS4 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nup54Q8BTS4 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
Nup54Q8BTS4 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nup54Q8BTS4 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nup54Q8BTS4 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nup54Q8BTS4 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nup54Q8BTS4 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nup54Q8BTS4 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nup54Q8BTS4 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.29□□□□□ -0.12
Nup54Q8BTS4 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nup54Q8BTS4 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nup54Q8BTS4 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nup54Q8BTS4 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
Nup54Q8BTS4 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nup54Q8BTS4 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nup54Q8BTS4 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nup54Q8BTS4 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nup54Q8BTS4 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nup54Q8BTS4 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nup54Q8BTS4 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Nup54Q8BTS4 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nup54Q8BTS4 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Nup54Q8BTS4 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nup54Q8BTS4 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Nup54Q8BTS4 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nup54Q8BTS4 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nup54Q8BTS4 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.28□□□□□ -0.12
Nup54Q8BTS4 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Nup54Q8BTS4 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC14.28□□□□□ -0.12
Nup54Q8BTS4 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
Nup54Q8BTS4 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC14.28□□□□□ -0.12
Nup54Q8BTS4 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.28□□□□□ -0.12
Nup54Q8BTS4 Gm6473-201ENSMUST00000188572 1210 ntBASIC14.28□□□□□ -0.12
Nup54Q8BTS4 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nup54Q8BTS4 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC14.28□□□□□ -0.12
Nup54Q8BTS4 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nup54Q8BTS4 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC14.28□□□□□ -0.12
Nup54Q8BTS4 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nup54Q8BTS4 AC135669.1-201ENSMUST00000213585 412 ntBASIC14.28□□□□□ -0.12
Nup54Q8BTS4 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
Nup54Q8BTS4 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nup54Q8BTS4 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nup54Q8BTS4 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nup54Q8BTS4 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nup54Q8BTS4 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nup54Q8BTS4 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Nup54Q8BTS4 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Nup54Q8BTS4 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nup54Q8BTS4 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Nup54Q8BTS4 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nup54Q8BTS4 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nup54Q8BTS4 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Nup54Q8BTS4 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Nup54Q8BTS4 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nup54Q8BTS4 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nup54Q8BTS4 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nup54Q8BTS4 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC14.27□□□□□ -0.12
Nup54Q8BTS4 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nup54Q8BTS4 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Nup54Q8BTS4 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
Nup54Q8BTS4 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Nup54Q8BTS4 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Nup54Q8BTS4 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nup54Q8BTS4 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
Nup54Q8BTS4 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC14.27□□□□□ -0.12
Nup54Q8BTS4 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nup54Q8BTS4 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.27□□□□□ -0.13
Nup54Q8BTS4 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nup54Q8BTS4 Gm12859-201ENSMUST00000117834 427 ntBASIC14.27□□□□□ -0.13
Nup54Q8BTS4 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC14.27□□□□□ -0.13
Nup54Q8BTS4 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Nup54Q8BTS4 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nup54Q8BTS4 Gm2445-201ENSMUST00000182798 989 ntBASIC14.27□□□□□ -0.13
Nup54Q8BTS4 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC14.27□□□□□ -0.13
Nup54Q8BTS4 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Nup54Q8BTS4 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nup54Q8BTS4 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC14.27□□□□□ -0.13
Nup54Q8BTS4 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Nup54Q8BTS4 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Nup54Q8BTS4 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nup54Q8BTS4 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nup54Q8BTS4 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nup54Q8BTS4 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nup54Q8BTS4 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nup54Q8BTS4 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nup54Q8BTS4 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.13
Nup54Q8BTS4 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nup54Q8BTS4 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nup54Q8BTS4 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Nup54Q8BTS4 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Nup54Q8BTS4 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nup54Q8BTS4 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nup54Q8BTS4 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nup54Q8BTS4 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nup54Q8BTS4 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup54Q8BTS4 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nup54Q8BTS4 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms