Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Rd3Q8BRE0 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rd3Q8BRE0 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rd3Q8BRE0 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Rd3Q8BRE0 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rd3Q8BRE0 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Rd3Q8BRE0 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rd3Q8BRE0 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rd3Q8BRE0 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Rd3Q8BRE0 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rd3Q8BRE0 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rd3Q8BRE0 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rd3Q8BRE0 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
Rd3Q8BRE0 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rd3Q8BRE0 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Rd3Q8BRE0 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rd3Q8BRE0 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Rd3Q8BRE0 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rd3Q8BRE0 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rd3Q8BRE0 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC14.78□□□□□ -0.04
Rd3Q8BRE0 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rd3Q8BRE0 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rd3Q8BRE0 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rd3Q8BRE0 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rd3Q8BRE0 Gm19078-201ENSMUST00000206311 727 ntBASIC14.78□□□□□ -0.04
Rd3Q8BRE0 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rd3Q8BRE0 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC14.78□□□□□ -0.04
Rd3Q8BRE0 Gm17794-201ENSMUST00000220252 955 ntBASIC14.78□□□□□ -0.04
Rd3Q8BRE0 Gm9899-201ENSMUST00000065519 555 ntBASIC14.78□□□□□ -0.04
Rd3Q8BRE0 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rd3Q8BRE0 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rd3Q8BRE0 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rd3Q8BRE0 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rd3Q8BRE0 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Rd3Q8BRE0 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rd3Q8BRE0 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rd3Q8BRE0 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rd3Q8BRE0 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rd3Q8BRE0 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.77□□□□□ -0.04
Rd3Q8BRE0 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Rd3Q8BRE0 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.77□□□□□ -0.04
Rd3Q8BRE0 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rd3Q8BRE0 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rd3Q8BRE0 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rd3Q8BRE0 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rd3Q8BRE0 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rd3Q8BRE0 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Rd3Q8BRE0 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC14.77□□□□□ -0.04
Rd3Q8BRE0 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rd3Q8BRE0 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rd3Q8BRE0 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.04
Rd3Q8BRE0 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rd3Q8BRE0 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Rd3Q8BRE0 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Rd3Q8BRE0 Gm11524-201ENSMUST00000119349 807 ntBASIC14.77□□□□□ -0.05
Rd3Q8BRE0 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Rd3Q8BRE0 Gm15429-201ENSMUST00000151268 798 ntBASIC14.77□□□□□ -0.05
Rd3Q8BRE0 Mir1982-201ENSMUST00000157368 74 ntBASIC14.77□□□□□ -0.05
Rd3Q8BRE0 Ighv1-51-201ENSMUST00000192903 354 ntBASIC14.77□□□□□ -0.05
Rd3Q8BRE0 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC14.77□□□□□ -0.05
Rd3Q8BRE0 AC166349.1-201ENSMUST00000220866 695 ntBASIC14.77□□□□□ -0.05
Rd3Q8BRE0 AC192088.1-201ENSMUST00000227561 301 ntBASIC14.77□□□□□ -0.05
Rd3Q8BRE0 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rd3Q8BRE0 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rd3Q8BRE0 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rd3Q8BRE0 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC14.77□□□□□ -0.05
Rd3Q8BRE0 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rd3Q8BRE0 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rd3Q8BRE0 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Rd3Q8BRE0 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Rd3Q8BRE0 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rd3Q8BRE0 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Rd3Q8BRE0 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Rd3Q8BRE0 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Rd3Q8BRE0 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rd3Q8BRE0 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rd3Q8BRE0 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.76□□□□□ -0.05
Rd3Q8BRE0 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rd3Q8BRE0 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rd3Q8BRE0 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.76□□□□□ -0.05
Rd3Q8BRE0 Gm5912-201ENSMUST00000122282 1438 ntBASIC14.76□□□□□ -0.05
Rd3Q8BRE0 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC14.76□□□□□ -0.05
Rd3Q8BRE0 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rd3Q8BRE0 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rd3Q8BRE0 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rd3Q8BRE0 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rd3Q8BRE0 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.76□□□□□ -0.05
Rd3Q8BRE0 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rd3Q8BRE0 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rd3Q8BRE0 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Rd3Q8BRE0 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rd3Q8BRE0 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Rd3Q8BRE0 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Rd3Q8BRE0 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rd3Q8BRE0 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Rd3Q8BRE0 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Rd3Q8BRE0 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC14.76□□□□□ -0.05
Rd3Q8BRE0 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC14.76□□□□□ -0.05
Rd3Q8BRE0 Gm8835-201ENSMUST00000173096 1169 ntBASIC14.76□□□□□ -0.05
Rd3Q8BRE0 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms